myRT

myRT report for GCA_002893205.1_ASM289320v1

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Seq: NJHX01000466.1 Cylindrospermopsis raciborskii S07 NODE_1173, whole genome shotgun sequence (13726 bp)
Overview 1 RT 1: 5116-8624 bp Neighborhood of RT #1 [5116, 8635] HEAT CpeS RVT_N RVT-GII RVT-GII GIIM CpeS cyt_b559_alpha Feature: gene Location: 5116-5787 bp Feature: domain Description: HEAT Location: 5125-5770 bp Feature: domain Description: HEAT Location: 51 25-5770 bp Feature: gene Location: 5926-6192 bp Feature: domain Description: CpeS Location: 5932-6160 bp Feature: domain Description: CpeS Location: 5932-61 60 bp Feature: gene Location: 6716-7816 bp Feature: RT Description: RVT_N Location: 6752-6923 bp Feature: RT Description: RVT_N Location: 6752-6923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6944-7298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6944-7298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7298-7463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7298-7463 bp Feature: domain Description: GIIM Note: maturase Location: 7523-7715 bp Feature: domain Description: GIIM Note: maturase Location: 7523-771 5 bp Feature: gene Location: 7970-8233 bp Feature: domain Description: CpeS Location: 7973-8180 bp Feature: domain Description: CpeS Location: 7973-81 80 bp Feature: gene Location: 8387-8635 bp Feature: domain Description: cyt_b559_alpha Location: 8393-8624 bp Feature: domain Description: cyt_b559_alpha Location: 8393-8624 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT (sd00044), CpeS (pfam09367), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), cyt_b559_alpha (TIGR01332)

Seq: NJHX01000009.1 Cylindrospermopsis raciborskii S07 NODE_13, whole genome shotgun sequence (40152 bp)
Overview 1 RT 1: 13960-18933 bp Neighborhood of RT #1 [13960, 19103] MviM QueC RVT_N RVT-GII GIIM DUF3157 Feature: gene Location: 13960-15039 bp Feature: domain Description: MviM Location: 14026-14977 bp Feature: domain Description: MviM Location: 1402 6-14977 bp Feature: gene Location: 15236-15904 bp Feature: domain Description: QueC Location: 15239-15896 bp Feature: domain Description: QueC Location: 152 39-15896 bp Feature: gene Location: 16037-17737 bp Feature: RT Description: RVT_N Location: 16064-16274 bp Feature: RT Description: RVT_N Location: 16064-162 74 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16328-17009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1632 8-17009 bp Feature: domain Description: GIIM Note: maturase Location: 17108-17342 bp Feature: domain Description: GIIM Note: maturase Location: 17108-17342 bp Feature: gene Location: 17884-18084 bp Feature: gene Location: 18399-19103 bp Feature: domain Description: DUF3157 Location: 18780-18933 bp Feature: domain Description: DUF3157 Location: 18780-18933 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MviM (COG0673), QueC (pfam06508), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3157 (pfam11355)

Seq: NJHX01000018.1 Cylindrospermopsis raciborskii S07 NODE_23, whole genome shotgun sequence (37094 bp)
Overview 1 RT 1: 28092-32751 bp Neighborhood of RT #1 [28092, 32783] TRX_NTR KOG0404 TRX_NTR RVT_N RVT-GII GIIM KOG0404 N_methyl Pilin_GH Feature: gene Location: 28092-28316 bp Feature: domain Description: TRX_NTR Location: 28095-28311 bp Feature: domain Description: TRX_NTR Location: 28095-283 11 bp Feature: gene Location: 28417-29571 bp Feature: domain Description: KOG0404 Location: 28420-29152 bp Feature: domain Description: KOG0404 Location: 28420-29152 bp Feature: domain Description: TRX_NTR Location: 29272-29557 bp Feature: domain Description: TRX_NTR Location: 29272-29557 bp Feature: gene Location: 29637-31202 bp Feature: RT Description: RVT_N Location: 29721-29934 bp Feature: RT Description: RVT_N Location: 29721-2993 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29979-30600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29979-3 0600 bp Feature: domain Description: GIIM Note: maturase Location: 30723-30945 bp Feature: domain Description: GIIM Note: maturase Location: 3 0723 -3 0945 bp Feature: gene Location: 31856-32044 bp Feature: domain Description: KOG0404 Location: 31886-32033 bp Feature: domain Description: KOG0404 Location: 3 1886-3 203 3 bp Feature: gene Location: 32259-32783 bp Feature: domain Description: N_methyl Location: 32319-32388 bp Feature: domain Description: N_methyl Location: 3 23 19-3 23 88 bp Feature: domain Description: Pilin_GH Location: 32424-32751 bp Feature: domain Description: Pilin_GH Location: 3 2424-3 2751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TRX_NTR (cd02949), KOG0404 (KOG0404, Thioredoxin reductase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N_methyl (pfam07963), Pilin_GH (pfam16734)

Seq: NJHX01000025.1 Cylindrospermopsis raciborskii S07 NODE_30, whole genome shotgun sequence (77359 bp)
Overview 1 RT 1: 22601-27729 bp Neighborhood of RT #1 [22601, 27734] DUF3598 RTPR RVT-GII GIIM RNR_II_monomer Feature: gene Location: 22601-23455 bp Feature: domain Description: DUF3598 Location: 22610-23441 bp Feature: domain Description: DUF3598 Location: 22610-234 4 1 bp Feature: gene Location: 23485-25440 bp Feature: domain Description: RTPR Location: 23488-25414 bp Feature: domain Description: RTPR Location: 234 88-254 14 bp Feature: gene Location: 25624-26862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25801-26398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25801-26398 bp Feature: domain Description: GIIM Note: maturase Location: 26485-26719 bp Feature: domain Description: GIIM Note: maturase Location: 264 85-26719 bp Feature: gene Location: 26889-27041 bp Feature: gene Location: 27471-27734 bp Feature: domain Description: RNR_II_monomer Location: 27534-27729 bp Feature: domain Description: RNR_II_monomer Location: 27534 -27729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3598 (pfam12204), RTPR (TIGR02505), RVT-GII, GIIM (pfam08388), RNR_II_monomer (cd01676)