myRT

myRT report for GCA_002893215.1_ASM289321v1

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Seq: NJHW01000088.1 Cylindrospermopsis raciborskii S10 NODE_148, whole genome shotgun sequence (46181 bp)
Overview 1 RT 1: 37571-41079 bp Neighborhood of RT #1 [37571, 41090] HEAT CpeS RVT_N RVT-GII RVT-GII GIIM CpeS cyt_b559_alpha Feature: gene Location: 37571-38242 bp Feature: domain Description: HEAT Location: 37580-38225 bp Feature: domain Description: HEAT Location: 37580-38225 bp Feature: gene Location: 38381-38647 bp Feature: domain Description: CpeS Location: 38387-38615 bp Feature: domain Description: CpeS Location: 38387-3861 5 bp Feature: gene Location: 39171-40271 bp Feature: RT Description: RVT_N Location: 39207-39378 bp Feature: RT Description: RVT_N Location: 39207-39378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39399-39753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39399-39753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39753-39918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39753-3991 8 bp Feature: domain Description: GIIM Note: maturase Location: 39978-40170 bp Feature: domain Description: GIIM Note: maturase Location: 39978-401 70 bp Feature: gene Location: 40425-40688 bp Feature: domain Description: CpeS Location: 40428-40635 bp Feature: domain Description: CpeS Location: 40428-40635 bp Feature: gene Location: 40842-41090 bp Feature: domain Description: cyt_b559_alpha Location: 40848-41079 bp Feature: domain Description: cyt_b559_alpha Location: 40848-41 079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT (sd00044), CpeS (pfam09367), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), cyt_b559_alpha (TIGR01332)

Seq: NJHW01000034.1 Cylindrospermopsis raciborskii S10 NODE_39, whole genome shotgun sequence (78431 bp)
Overview 1 RT 1: 49459-54578 bp Neighborhood of RT #1 [49459, 54592] RNR_II_monomer RVT-GII GIIM RTPR DUF3598 Feature: gene Location: 49459-49722 bp Feature: domain Description: RNR_II_monomer Location: 49522-49717 bp Feature: domain Description: RNR_II_monomer Location: 4952 2 -49717 bp Feature: gene Location: 50152-50304 bp Feature: gene Location: 50331-51569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50508-51105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50508-51105 bp Feature: domain Description: GIIM Note: maturase Location: 51192-51426 bp Feature: domain Description: GIIM Note: maturase Location: 51192 -5142 6 bp Feature: gene Location: 51750-53708 bp Feature: domain Description: RTPR Location: 51753-53682 bp Feature: domain Description: RTPR Location: 51753-53682 bp Feature: gene Location: 53738-54592 bp Feature: domain Description: DUF3598 Location: 53747-54578 bp Feature: domain Description: DUF3598 Location: 53747-54578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNR_II_monomer (cd01676), RVT-GII, GIIM (pfam08388), RTPR (TIGR02505), DUF3598 (pfam12204)

Seq: NJHW01000047.1 Cylindrospermopsis raciborskii S10 NODE_64, whole genome shotgun sequence (100469 bp)
Overview 1 RT 1: 74277-79250 bp Neighborhood of RT #1 [74277, 79420] MviM QueC RVT_N RVT-GII GIIM DUF3157 Feature: gene Location: 74277-75356 bp Feature: domain Description: MviM Location: 74343-75294 bp Feature: domain Description: MviM Location: 743 43 -75294 bp Feature: gene Location: 75553-76221 bp Feature: domain Description: QueC Location: 75556-76213 bp Feature: domain Description: QueC Location: 75556-76213 bp Feature: gene Location: 76354-78054 bp Feature: RT Description: RVT_N Location: 76381-76591 bp Feature: RT Description: RVT_N Location: 763 81-76591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76645-77326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76645-773 26 bp Feature: domain Description: GIIM Note: maturase Location: 77425-77659 bp Feature: domain Description: GIIM Note: maturase Location: 77425-77659 bp Feature: gene Location: 78201-78401 bp Feature: gene Location: 78716-79420 bp Feature: domain Description: DUF3157 Location: 79097-79250 bp Feature: domain Description: DUF3 157 Location: 79097-79250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MviM (COG0673), QueC (pfam06508), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3157 (pfam11355)

Seq: NJHW01000384.1 Cylindrospermopsis raciborskii S10 NODE_897, whole genome shotgun sequence (39701 bp)
Overview 1 RT 1: 27997-32656 bp Neighborhood of RT #1 [27997, 32688] TRX_NTR KOG0404 TRX_NTR RVT_N RVT-GII GIIM KOG0404 N_methyl Pilin_GH Feature: gene Location: 27997-28221 bp Feature: domain Description: TRX_NTR Location: 28000-28216 bp Feature: domain Description: TRX_NTR Location: 28000-28216 bp Feature: gene Location: 28322-29476 bp Feature: domain Description: KOG0404 Location: 28325-29057 bp Feature: domain Description: KOG04 04 Location: 28325-29057 bp Feature: domain Description: TRX_NTR Location: 29177-29462 bp Feature: domain Description: TRX_NTR Location: 29177-294 62 bp Feature: gene Location: 29542-31107 bp Feature: RT Description: RVT_N Location: 29626-29839 bp Feature: RT Description: RVT_N Location: 29626-29839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29884-30505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29884 -30505 bp Feature: domain Description: GIIM Note: maturase Location: 30628-30850 bp Feature: domain Description: GIIM Note: maturase Location: 30628-30850 bp Feature: gene Location: 31761-31949 bp Feature: domain Description: KOG0404 Location: 31791-31938 bp Feature: domain Description: KOG04 04 Location: 31791-31938 bp Feature: gene Location: 32164-32688 bp Feature: domain Description: N_methyl Location: 32224-32293 bp Feature: domain Description: N_methyl Location: 32224 -32293 bp Feature: domain Description: Pilin_GH Location: 32329-32656 bp Feature: domain Description: Pilin_GH Location: 32329-32656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TRX_NTR (cd02949), KOG0404 (KOG0404, Thioredoxin reductase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N_methyl (pfam07963), Pilin_GH (pfam16734)