myRT

myRT report for GCA_002893245.1_ASM289324v1

Download annotations/find similar RTs

Seq: NJHY01000001.1 Cylindrospermopsis raciborskii S06 NODE_1, whole genome shotgun sequence (200932 bp)
Overview 1 RT 1: 146150-151278 bp Neighborhood of RT #1 [146150, 151283] DUF3598 RTPR RVT-GII GIIM RNR_II_monomer Feature: gene Location: 146150-147004 bp Feature: domain Description: DUF3598 Location: 146159-146990 bp Feature: domain Description: DUF3598 Location: 1 461 59-1 46990 bp Feature: gene Location: 147034-148989 bp Feature: domain Description: RTPR Location: 147037-148963 bp Feature: domain Description: RTPR Location: 1 47037-1 48963 bp Feature: gene Location: 149173-150411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149350-149947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 49350-1 49947 bp Feature: domain Description: GIIM Note: maturase Location: 150034-150268 bp Feature: domain Description: GIIM Note: maturase Location: 1 50034-1 50268 bp Feature: gene Location: 150438-150590 bp Feature: gene Location: 151020-151283 bp Feature: domain Description: RNR_II_monomer Location: 151083-151278 bp Feature: domain Description: RNR_II_monomer Location: 1 51 083-1 51 278 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3598 (pfam12204), RTPR (TIGR02505), RVT-GII, GIIM (pfam08388), RNR_II_monomer (cd01676)

Seq: NJHY01000019.1 Cylindrospermopsis raciborskii S06 NODE_36, whole genome shotgun sequence (13422 bp)
Overview 1 RT 1: 4762-8264 bp Neighborhood of RT #1 [4762, 8281] cyt_b559_alpha CpeS RVT_N RVT-GII RVT-GII GIIM CpeS HEAT Feature: gene Location: 4762-5010 bp Feature: domain Description: cyt_b559_alpha Location: 4768-4999 bp Feature: domain Description: cyt_b559_alpha Location: 4768-4999 bp Feature: gene Location: 5164-5427 bp Feature: domain Description: CpeS Location: 5167-5374 bp Feature: domain Description: CpeS Location: 5167-5374 bp Feature: gene Location: 5581-6681 bp Feature: RT Description: RVT_N Location: 5617-5788 bp Feature: RT Description: RVT_N Location: 5617-5788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5809-6163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5809-6163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6163-6328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6163-632 8 bp Feature: domain Description: GIIM Note: maturase Location: 6388-6580 bp Feature: domain Description: GIIM Note: maturase Location: 6388-6580 bp Feature: gene Location: 7205-7471 bp Feature: domain Description: CpeS Location: 7211-7439 bp Feature: domain Description: CpeS Location: 72 11-7439 bp Feature: gene Location: 7610-8281 bp Feature: domain Description: HEAT Location: 7619-8264 bp Feature: domain Description: HEAT Location: 7619-82 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cyt_b559_alpha (TIGR01332), CpeS (pfam09367), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HEAT (sd00044)

Seq: NJHY01000005.1 Cylindrospermopsis raciborskii S06 NODE_5, whole genome shotgun sequence (101096 bp)
Overview 1 RT 1: 74290-79263 bp Neighborhood of RT #1 [74290, 79433] MviM QueC RVT_N RVT-GII GIIM DUF3157 Feature: gene Location: 74290-75369 bp Feature: domain Description: MviM Location: 74356-75307 bp Feature: domain Description: MviM Location: 743 56-753 07 bp Feature: gene Location: 75566-76234 bp Feature: domain Description: QueC Location: 75569-76226 bp Feature: domain Description: QueC Location: 75569-76226 bp Feature: gene Location: 76367-78067 bp Feature: RT Description: RVT_N Location: 76394-76604 bp Feature: RT Description: RVT_N Location: 763 94-76604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76658-77339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76658-773 3 9 bp Feature: domain Description: GIIM Note: maturase Location: 77438-77672 bp Feature: domain Description: GIIM Note: maturase Location: 7743 8-77672 bp Feature: gene Location: 78214-78414 bp Feature: gene Location: 78729-79433 bp Feature: domain Description: DUF3157 Location: 79110-79263 bp Feature: domain Description: DUF3 157 Location: 79110-79263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MviM (COG0673), QueC (pfam06508), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3157 (pfam11355)

Seq: NJHY01000037.1 Cylindrospermopsis raciborskii S06 NODE_60, whole genome shotgun sequence (37106 bp)
Overview 1 RT 1: 28078-32737 bp Neighborhood of RT #1 [28078, 32769] TRX_NTR KOG0404 TRX_NTR RVT_N RVT-GII GIIM KOG0404 N_methyl Pilin_GH Feature: gene Location: 28078-28302 bp Feature: domain Description: TRX_NTR Location: 28081-28297 bp Feature: domain Description: TRX_NTR Location: 28081-28297 bp Feature: gene Location: 28403-29557 bp Feature: domain Description: KOG0404 Location: 28406-29138 bp Feature: domain Description: KOG04 04 Location: 284 06-29138 bp Feature: domain Description: TRX_NTR Location: 29258-29543 bp Feature: domain Description: TRX_NTR Location: 29258-2954 3 bp Feature: gene Location: 29623-31188 bp Feature: RT Description: RVT_N Location: 29707-29920 bp Feature: RT Description: RVT_N Location: 29707-29920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29965-30586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29965-30586 bp Feature: domain Description: GIIM Note: maturase Location: 30709-30931 bp Feature: domain Description: GIIM Note: maturase Location: 30709-30931 bp Feature: gene Location: 31842-32030 bp Feature: domain Description: KOG0404 Location: 31872-32019 bp Feature: domain Description: KOG04 04 Location: 31872-32019 bp Feature: gene Location: 32245-32769 bp Feature: domain Description: N_methyl Location: 32305-32374 bp Feature: domain Description: N_methyl Location: 32305-32374 bp Feature: domain Description: Pilin_GH Location: 32410-32737 bp Feature: domain Description: Pilin_GH Location: 324 10-32737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TRX_NTR (cd02949), KOG0404 (KOG0404, Thioredoxin reductase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N_methyl (pfam07963), Pilin_GH (pfam16734)