myRT

myRT report for GCA_002893265.1_ASM289326v1

Download annotations/find similar RTs

Seq: NJHZ01000137.1 Cylindrospermopsis raciborskii S05 NODE_254, whole genome shotgun sequence (17706 bp)
Overview 1 RT 1: 5136-8644 bp Neighborhood of RT #1 [5136, 8655] HEAT CpeS RVT_N RVT-GII RVT-GII GIIM CpeS cyt_b559_alpha Feature: gene Location: 5136-5807 bp Feature: domain Description: HEAT Location: 5145-5790 bp Feature: domain Description: HEAT Location: 51 45-5790 bp Feature: gene Location: 5946-6212 bp Feature: domain Description: CpeS Location: 5952-6180 bp Feature: domain Description: CpeS Location: 5952-61 80 bp Feature: gene Location: 6736-7836 bp Feature: RT Description: RVT_N Location: 6772-6943 bp Feature: RT Description: RVT_N Location: 6772-6943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6964-7318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6964-731 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7318-7483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 731 8-7483 bp Feature: domain Description: GIIM Note: maturase Location: 7543-7735 bp Feature: domain Description: GIIM Note: maturase Location: 7543-7735 bp Feature: gene Location: 7990-8253 bp Feature: domain Description: CpeS Location: 7993-8200 bp Feature: domain Description: CpeS Location: 7993-8200 bp Feature: gene Location: 8407-8655 bp Feature: domain Description: cyt_b559_alpha Location: 8413-8644 bp Feature: domain Description: cyt_b559_alpha Location: 841 3-8644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT (sd00044), CpeS (pfam09367), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), cyt_b559_alpha (TIGR01332)

Seq: NJHZ01000004.1 Cylindrospermopsis raciborskii S05 NODE_4, whole genome shotgun sequence (200523 bp)
Overview 1 RT 1: 145747-150875 bp Neighborhood of RT #1 [145747, 150880] DUF3598 RTPR RVT-GII GIIM RNR_II_monomer Feature: gene Location: 145747-146601 bp Feature: domain Description: DUF3598 Location: 145756-146587 bp Feature: domain Description: DUF3598 Location: 145756-146587 bp Feature: gene Location: 146631-148586 bp Feature: domain Description: RTPR Location: 146634-148560 bp Feature: domain Description: RTPR Location: 146634-148560 bp Feature: gene Location: 148770-150008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148947-149544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148947-149544 bp Feature: domain Description: GIIM Note: maturase Location: 149631-149865 bp Feature: domain Description: GIIM Note: maturase Location: 149631-149865 bp Feature: gene Location: 150035-150187 bp Feature: gene Location: 150617-150880 bp Feature: domain Description: RNR_II_monomer Location: 150680-150875 bp Feature: domain Description: RNR_II_monomer Location: 150680-150875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3598 (pfam12204), RTPR (TIGR02505), RVT-GII, GIIM (pfam08388), RNR_II_monomer (cd01676)

Seq: NJHZ01000035.1 Cylindrospermopsis raciborskii S05 NODE_47, whole genome shotgun sequence (28434 bp)
Overview 1 RT 1: 10106-14382 bp Neighborhood of RT #1 [10106, 14444] RVT_N RVT-GII GIIM QueC MviM Feature: gene Location: 10106-10243 bp Feature: gene Location: 10320-10520 bp Feature: gene Location: 10667-12367 bp Feature: RT Description: RVT_N Location: 10694-10904 bp Feature: RT Description: RVT_N Location: 10694-10904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10958-11639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10958-1163 9 bp Feature: domain Description: GIIM Note: maturase Location: 11738-11972 bp Feature: domain Description: GIIM Note: maturase Location: 1173 8-11972 bp Feature: gene Location: 12500-13168 bp Feature: domain Description: QueC Location: 12503-13160 bp Feature: domain Description: QueC Location: 12503 -13 160 bp Feature: gene Location: 13365-14444 bp Feature: domain Description: MviM Location: 13431-14382 bp Feature: domain Description: MviM Location: 13 43 1-143 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), QueC (pfam06508), MviM (COG0673)

Seq: NJHZ01000041.1 Cylindrospermopsis raciborskii S05 NODE_56, whole genome shotgun sequence (36972 bp)
Overview 1 RT 1: 27950-32609 bp Neighborhood of RT #1 [27950, 32641] TRX_NTR KOG0404 TRX_NTR RVT_N RVT-GII GIIM KOG0404 N_methyl Pilin_GH Feature: gene Location: 27950-28174 bp Feature: domain Description: TRX_NTR Location: 27953-28169 bp Feature: domain Description: TRX_NTR Location: 27953-28169 bp Feature: gene Location: 28275-29429 bp Feature: domain Description: KOG0404 Location: 28278-29010 bp Feature: domain Description: KOG04 04 Location: 28278-29010 bp Feature: domain Description: TRX_NTR Location: 29130-29415 bp Feature: domain Description: TRX_NTR Location: 29130-294 15 bp Feature: gene Location: 29495-31060 bp Feature: RT Description: RVT_N Location: 29579-29792 bp Feature: RT Description: RVT_N Location: 29579-29792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29837-30458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29837-304 58 bp Feature: domain Description: GIIM Note: maturase Location: 30581-30803 bp Feature: domain Description: GIIM Note: maturase Location: 30581-30803 bp Feature: gene Location: 31714-31902 bp Feature: domain Description: KOG0404 Location: 31744-31891 bp Feature: domain Description: KOG04 04 Location: 3174 4 -31891 bp Feature: gene Location: 32117-32641 bp Feature: domain Description: N_methyl Location: 32177-32246 bp Feature: domain Description: N_methyl Location: 32177-3224 6 bp Feature: domain Description: Pilin_GH Location: 32282-32609 bp Feature: domain Description: Pilin_GH Location: 32282-32609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TRX_NTR (cd02949), KOG0404 (KOG0404, Thioredoxin reductase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N_methyl (pfam07963), Pilin_GH (pfam16734)