myRT

myRT report for GCA_002894575.1_ASM289457v1

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Seq: NCQX01000015.1 Salinibacter ruber strain SP273 scaffold_14, whole genome shotgun sequence (61299 bp)
Overview 1 RT 1: 5661-13492 bp Neighborhood of RT #1 [5661, 14265] PemK_toxin HTH_3 ImmA RVT-UG12 SbcC SbcC YhaN Feature: gene Location: 5661-6047 bp Feature: domain Description: PemK_toxin Location: 5712-6033 bp Feature: domain Description: PemK_toxin Location: 571 2-6033 bp Feature: gene Location: 6098-7339 bp Feature: domain Description: HTH_3 Location: 6134-6299 bp Feature: domain Description: HTH_3 Location: 61 34-6299 bp Feature: domain Description: ImmA Location: 6500-7100 bp Feature: domain Description: ImmA Location: 6500-71 00 bp Feature: gene Location: 7531-9075 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 7876-8317 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 7876-831 7 bp Feature: gene Location: 9084-9983 bp Feature: gene Location: 10723-14265 bp Feature: domain Description: SbcC Location: 10837-10906 bp Feature: domain Description: SbcC Location: 1 0837-1 0906 bp Feature: domain Description: SbcC Location: 11194-11710 bp Feature: domain Description: SbcC Location: 1 1 1 94-1 1 71 0 bp Feature: domain Description: YhaN Location: 12145-13492 bp Feature: domain Description: YhaN Location: 1 21 45-1 3492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PemK_toxin (pfam02452), HTH_3 (pfam01381), ImmA (COG2856), RVT-UG12, SbcC (COG0419), YhaN (COG4717)

Seq: NCQX01000213.1 Salinibacter ruber strain SP273 scaffold_212, whole genome shotgun sequence (590 bp)
Overview 1 RT 1: 3-426 bp Neighborhood of RT #1 [3, 587] RVT-GII Feature: gene Location: 3-587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-42 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII