myRT

myRT report for GCA_002896915.1_ASM289691v1

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Seq: PPFT01000033.1 Bacillus cereus strain EGD-AQ9 Scaffold_33, whole genome shotgun sequence (476513 bp)
Overview 1 RT 1: 238090-243273 bp Neighborhood of RT #1 [238090, 243273] RVT-Retrons Trypsin_2 IENR1 Feature: gene Location: 238090-238584 bp Feature: gene Location: 238821-239489 bp Feature: gene Location: 239745-241502 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 239901-240495 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 239901 -240495 bp Feature: domain Description: Trypsin_2 Location: 240912-241371 bp Feature: domain Description: Trypsin_2 Location: 24091 2-241 371 bp Feature: gene Location: 241902-242360 bp Feature: domain Description: IENR1 Location: 242238-242352 bp Feature: domain Description: IENR1 Location: 242238-242352 bp Feature: gene Location: 242728-243273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Trypsin_2 (pfam13365), IENR1 (smart00497)

Seq: PPFT01000038.1 Bacillus cereus strain EGD-AQ9 Scaffold_38, whole genome shotgun sequence (2685 bp)
Overview 1 RT 1: 117-2391 bp Neighborhood of RT #1 [117, 2391] RVT-GII HNHc Feature: gene Location: 117-1949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-1122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-112 2 bp Feature: domain Description: HNHc Note: nucleases Location: 1701-1833 bp Feature: domain Description: HNHc Note: nucleases Location: 1701-1833 bp Feature: gene Location: 2233-2391 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: PPFT01000006.1 Bacillus cereus strain EGD-AQ9 Scaffold_6, whole genome shotgun sequence (172926 bp)
Overview 1 RT 1: 81803-91362 bp 2 RT 2: 135777-141009 bp 3 RT 3: 145511-154626 bp Neighborhood of RT #1 [81803, 91362] RVT-GII HNHc RVT_N RVT-GII GIIM HNH DEXDc Neighborhood of RT #2 [135777, 141009] beta_clamp RVT-GII COG4712 Neighborhood of RT #3 [145511, 154626] rpsA nuc_hydro RVT_N RVT-GII GIIM TraG-D_C Ftsk_gamma Ftsk_gamma Feature: gene Location: 81803-82501 bp Feature: gene Location: 82518-83273 bp Feature: gene Location: 83393-85291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83717-84455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 717-84455 bp Feature: domain Description: HNHc Note: nucleases Location: 85034-85181 bp Feature: domain Description: HNHc Note: nucleases Location: 8503 4-85181 bp Feature: gene Location: 86143-87954 bp Feature: RT Description: RVT_N Location: 86197-86443 bp Feature: RT Description: RVT_N Location: 86197-86443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86497-87151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86497-87151 bp Feature: domain Description: GIIM Note: maturase Location: 87214-87448 bp Feature: domain Description: GIIM Note: maturase Location: 87214-87448 bp Feature: domain Description: HNH Note: nucleases Location: 87688-87823 bp Feature: domain Description: HNH Note: nucleases Location: 87688-87823 bp Feature: gene Location: 88526-91111 bp Feature: domain Description: DEXDc Location: 89303-90257 bp Feature: domain Description: DEXDc Location: 893 03 -90257 bp Feature: gene Location: 91171-91362 bp Feature: gene Location: 135777-136889 bp Feature: domain Description: beta_clamp Location: 135780-136884 bp Feature: domain Description: beta_clamp Location: 13 5780-13 6884 bp Feature: gene Location: 136970-137497 bp Feature: gene Location: 137575-139476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137893-138595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 7893 -13 8595 bp Feature: gene Location: 140235-140591 bp Feature: domain Description: COG4712 Location: 140244-140586 bp Feature: domain Description: COG4712 Location: 140244-140586 bp Feature: gene Location: 140632-141009 bp Feature: gene Location: 145511-146494 bp Feature: domain Description: rpsA Location: 145778-146315 bp Feature: domain Description: rpsA Location: 145778-1463 15 bp Feature: gene Location: 147088-148059 bp Feature: domain Description: nuc_hydro Location: 147124-148030 bp Feature: domain Description: nuc_hydro Location: 147124-14803 0 bp Feature: gene Location: 148779-150425 bp Feature: RT Description: RVT_N Location: 148821-149058 bp Feature: RT Description: RVT_N Location: 148821-149058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149112-149772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149112-149772 bp Feature: domain Description: GIIM Note: maturase Location: 149841-150072 bp Feature: domain Description: GIIM Note: maturase Location: 149841-150072 bp Feature: gene Location: 150638-154138 bp Feature: domain Description: TraG-D_C Location: 152255-152615 bp Feature: domain Description: TraG-D_C Location: 152255-152615 bp Feature: domain Description: Ftsk_gamma Location: 153023-153200 bp Feature: domain Description: Ftsk_gamma Location: 153 023 -153 200 bp Feature: domain Description: Ftsk_gamma Location: 153332-153467 bp Feature: domain Description: Ftsk_gamma Location: 153 3 3 2-153 467 bp Feature: gene Location: 154156-154626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), RVT_N (pfam13655), GIIM (pfam08388), HNH (pfam01844), DEXDc (smart00487), beta_clamp (cl29549), COG4712 (Uncharacterized protein ), rpsA (TIGR00717), nuc_hydro (cl00226)
TraG-D_C (pfam12696), Ftsk_gamma (smart00843)