myRT

myRT report for GCA_002896955.1_ASM289695v1

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Seq: NIOK01000128.1 Pseudoclostridium thermosuccinogenes strain DSM 5808 NODE_128_length_2291_cov_322.073_ID_15485, whole genome shotgun sequence (2291 bp)
Overview 1 RT 1: 1-2094 bp Neighborhood of RT #1 [1, 2195] PHA02517 RVT-GII GIIM Feature: gene Location: 1-768 bp Feature: domain Description: PHA02517 Location: 115-769 bp Feature: domain Description: PHA0251 7 Location: 1 1 5-769 bp Feature: gene Location: 873-2195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1128-1821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 28-1 821 bp Feature: domain Description: GIIM Note: maturase Location: 1881-2094 bp Feature: domain Description: GIIM Note: maturase Location: 1 881 -2094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NIOK01000132.1 Pseudoclostridium thermosuccinogenes strain DSM 5808 NODE_132_length_2077_cov_126.813_ID_15493, whole genome shotgun sequence (2077 bp)
Overview 1 RT 1: 1-2074 bp Neighborhood of RT #1 [1, 2074] RVT-GII GIIM Feature: gene Location: 1-141 bp Feature: gene Location: 149-1417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392-1016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392 -1016 bp Feature: domain Description: GIIM Note: maturase Location: 1112-1328 bp Feature: domain Description: GIIM Note: maturase Location: 1112 -132 8 bp Feature: gene Location: 1613-2074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NIOK01000176.1 Pseudoclostridium thermosuccinogenes strain DSM 5808 NODE_176_length_582_cov_74.6869_ID_15581, whole genome shotgun sequence (582 bp)
Overview 1 RT 1: 186-492 bp Neighborhood of RT #1 [186, 566] RVT-UG6 Feature: gene Location: 186-566 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 189-492 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 189-492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG6

Seq: NIOK01000076.1 Pseudoclostridium thermosuccinogenes strain DSM 5808 NODE_76_length_11559_cov_125.109_ID_15381, whole genome shotgun sequence (11559 bp)
Overview 1 RT 1: 2-2148 bp Neighborhood of RT #1 [2, 2148] rve_3 RVT-GII Feature: gene Location: 2-130 bp Feature: domain Description: rve_3 Location: 5-83 bp Feature: domain Description: rve_3 Location: 5-83 bp Feature: gene Location: 552-836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 555-762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 555-762 bp Feature: gene Location: 1393-1575 bp Feature: gene Location: 1984-2148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_3 (pfam13683), RVT-GII

Seq: NIOK01000081.1 Pseudoclostridium thermosuccinogenes strain DSM 5808 NODE_81_length_10680_cov_149.284_ID_15391, whole genome shotgun sequence (10680 bp)
Overview 1 RT 1: 5736-10238 bp Neighborhood of RT #1 [5736, 10249] RVT-GII GIIM PAF-AH_p_II DraG Feature: gene Location: 5736-5933 bp Feature: gene Location: 6118-6345 bp Feature: gene Location: 6355-7659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6661-7300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6661-7300 bp Feature: domain Description: GIIM Note: maturase Location: 7378-7594 bp Feature: domain Description: GIIM Note: maturase Location: 7378-75 94 bp Feature: gene Location: 8072-9166 bp Feature: domain Description: PAF-AH_p_II Location: 8399-9161 bp Feature: domain Description: PAF-AH_p_II Location: 8399-9161 bp Feature: gene Location: 9815-10249 bp Feature: domain Description: DraG Location: 9836-10238 bp Feature: domain Description: DraG Location: 9836-10238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PAF-AH_p_II (pfam03403), DraG (COG1397)