myRT

myRT report for GCA_002897475.1_ASM289747v1

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Seq: BDEE01000077.1 Tetragenococcus halophilus subsp. halophilus DNA, contig: contig77, whole genome shotgun sequence (317 bp)
Overview 1 RT 1: 1-316 bp Neighborhood of RT #1 [1, 315] RVT-GII Feature: gene Location: 1-315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-31 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BDEE01000080.1 Tetragenococcus halophilus subsp. halophilus DNA, contig: contig80, whole genome shotgun sequence (1809 bp)
Overview 1 RT 1: 78-1176 bp Neighborhood of RT #1 [78, 1367] RVT-GII GIIM Feature: gene Location: 78-1367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294-909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 94-909 bp Feature: domain Description: GIIM Note: maturase Location: 969-1176 bp Feature: domain Description: GIIM Note: maturase Location: 969-1176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BDEE01000091.1 Tetragenococcus halophilus subsp. halophilus DNA, contig: contig91, whole genome shotgun sequence (977 bp)
Overview 1 RT 1: 507-972 bp Neighborhood of RT #1 [507, 974] RVT-GII Feature: gene Location: 507-974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708-972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708-972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BDEE01000114.1 Tetragenococcus halophilus subsp. halophilus DNA, contig: contig114, whole genome shotgun sequence (340 bp)
Overview 1 RT 1: 1-340 bp Neighborhood of RT #1 [1, 339] RVT-GII GIIM Feature: gene Location: 1-339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 -163 bp Feature: domain Description: GIIM Note: maturase Location: 220-340 bp Feature: domain Description: GIIM Note: maturase Location: 220-34 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BDEE01000119.1 Tetragenococcus halophilus subsp. halophilus DNA, contig: contig119, whole genome shotgun sequence (7722 bp)
Overview 1 RT 1: 568-3957 bp Neighborhood of RT #1 [568, 3980] RVT-GII GIIM SnoaL_2 PRK09441 Feature: gene Location: 568-1866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 769-1387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 769-1387 bp Feature: domain Description: GIIM Note: maturase Location: 1444-1651 bp Feature: domain Description: GIIM Note: maturase Location: 1444-165 1 bp Feature: gene Location: 2035-2415 bp Feature: domain Description: SnoaL_2 Location: 2062-2371 bp Feature: domain Description: SnoaL_2 Location: 2062-2371 bp Feature: gene Location: 2481-3980 bp Feature: domain Description: PRK09441 Location: 2520-3957 bp Feature: domain Description: PRK09441 Location: 25 20-395 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_2 (pfam12680), PRK09441 (cytoplasmic alpha-amylase; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: BDEE01000147.1 Tetragenococcus halophilus subsp. halophilus DNA, contig: contig147, whole genome shotgun sequence (1055 bp)
Overview 1 RT 1: 94-1026 bp Neighborhood of RT #1 [94, 1052] GIIM RVT-GII Feature: gene Location: 94-450 bp Feature: domain Description: GIIM Note: maturase Location: 100-295 bp Feature: domain Description: GIIM Note: maturase Location: 100-295 bp Feature: gene Location: 504-1052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 510-1026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 510-1026 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BDEE01000153.1 Tetragenococcus halophilus subsp. halophilus DNA, contig: contig153, whole genome shotgun sequence (24790 bp)
Overview 1 RT 1: 20993-24785 bp Neighborhood of RT #1 [20993, 24787] RNase_R smpB RVT-GII Feature: gene Location: 20993-23311 bp Feature: domain Description: RNase_R Location: 21008-23144 bp Feature: domain Description: RNase_R Location: 21008-23144 bp Feature: gene Location: 23335-23793 bp Feature: domain Description: smpB Location: 23356-23785 bp Feature: domain Description: smpB Location: 23356-237 85 bp Feature: gene Location: 24320-24787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24521-24785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24521-247 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_R (TIGR02063), smpB (TIGR00086), RVT-GII

Seq: BDEE01000175.1 Tetragenococcus halophilus subsp. halophilus DNA, contig: contig175, whole genome shotgun sequence (729 bp)
Overview 1 RT 1: 2-584 bp Neighborhood of RT #1 [2, 584] RVT-GII Feature: gene Location: 2-313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221-311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221-311 bp Feature: gene Location: 384-584 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII