myRT

myRT report for GCA_002899365.1_ASM289936v1

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Seq: PPGD01000025.1 Serratia marcescens subsp. marcescens ATCC 13880 NODE_25_length_13665_cov_36.711756, whole genome shotgun sequence (13665 bp)
Overview 1 RT 1: 113-3215 bp Neighborhood of RT #1 [113, 3334] RVT-DGRs CaiF_GrlA Feature: gene Location: 113-586 bp Feature: gene Location: 946-2217 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1138-1834 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 38-1 834 bp Feature: gene Location: 2363-2497 bp Feature: gene Location: 2873-3334 bp Feature: domain Description: CaiF_GrlA Location: 2948-3215 bp Feature: domain Description: CaiF_GrlA Location: 2948-321 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, CaiF_GrlA (pfam07180)

Seq: PPGD01000009.1 Serratia marcescens subsp. marcescens ATCC 13880 NODE_9_length_190473_cov_18.722642, whole genome shotgun sequence (190473 bp)
Overview 1 RT 1: 15600-19345 bp Neighborhood of RT #1 [15600, 19345] PRK15287 FimA RVT-UG4 Feature: gene Location: 15600-16100 bp Feature: domain Description: PRK15287 Location: 15654-16095 bp Feature: domain Description: PRK152 87 Location: 15654-16095 bp Feature: gene Location: 16111-16686 bp Feature: domain Description: FimA Location: 16174-16684 bp Feature: domain Description: FimA Location: 16174-16684 bp Feature: gene Location: 16704-17690 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 17061-17508 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 17061-17508 bp Feature: gene Location: 17732-18571 bp Feature: gene Location: 19202-19345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15287 (fimbrial minor subunit StfF), FimA (pfam16970), RVT-UG4