myRT

myRT report for GCA_002899875.1_ASM289987v1

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Seq: PPEH01000004.1 Chryseobacterium lactis strain NCTC11390 scaffold_4, whole genome shotgun sequence (584344 bp)
Overview 1 RT 1: 329248-334742 bp Neighborhood of RT #1 [329248, 334750] RVT-UG7 groEL Feature: gene Location: 329248-329505 bp Feature: gene Location: 329733-330464 bp Feature: gene Location: 330461-332053 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 330845-331262 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 330845-331 262 bp Feature: gene Location: 332372-332941 bp Feature: gene Location: 333125-334750 bp Feature: domain Description: groEL Location: 333128-334742 bp Feature: domain Description: groEL Location: 3331 28-334742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, groEL (PRK12852)

Seq: PPEH01000006.1 Chryseobacterium lactis strain NCTC11390 scaffold_6, whole genome shotgun sequence (302739 bp)
Overview 1 RT 1: 141584-148511 bp Neighborhood of RT #1 [141584, 148558] Bac_Flav_CT_J DUF4141 VirB5 RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF4133 Feature: gene Location: 141584-142579 bp Feature: domain Description: Bac_Flav_CT_J Location: 141590-142556 bp Feature: domain Description: Bac_Flav_CT_J Location: 141590-142 556 bp Feature: gene Location: 142582-143214 bp Feature: domain Description: DUF4141 Location: 142600-142753 bp Feature: domain Description: DUF4141 Location: 142 600-142 753 bp Feature: domain Description: VirB5 Location: 142891-143101 bp Feature: domain Description: VirB5 Location: 142 891-143101 bp Feature: gene Location: 143474-145348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143798-144620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143798-14462 0 bp Feature: domain Description: Intron_maturas2 Location: 144755-144971 bp Feature: domain Description: Intron_maturas2 Location: 144755-144971 bp Feature: domain Description: HNHc Note: nucleases Location: 145148-145319 bp Feature: domain Description: HNHc Note: nucleases Location: 145148-145319 bp Feature: gene Location: 145839-148232 bp Feature: domain Description: Bac_Flav_CT_G Location: 145842-148224 bp Feature: domain Description: Bac_Flav_CT_G Location: 145842 -1482 2 4 bp Feature: gene Location: 148229-148558 bp Feature: domain Description: DUF4133 Location: 148244-148511 bp Feature: domain Description: DUF4133 Location: 1482 44-148511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_J (TIGR03782), DUF4141 (pfam13605), VirB5 (TIGR02791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_G (TIGR03783), DUF4133 (pfam13571)