myRT

myRT report for GCA_002900215.1_ASM290021v1

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Seq: MDVL01000466.1 Euhalothece sp. KZN 001 cyano_08_contig_15, whole genome shotgun sequence (8387 bp)
Overview 1 RT 1: 708-8309 bp Neighborhood of RT #1 [708, 8386] RVT_N RVT-GII GIIM McrA InsQ RVT_N RVT-GII GIIM McrA OrfB_Zn_ribbon RVT_N RVT-GII GIIM Feature: gene Location: 708-2495 bp Feature: RT Description: RVT_N Location: 741-987 bp Feature: RT Description: RVT_N Location: 741 -987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029-1722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 029-1 722 bp Feature: domain Description: GIIM Note: maturase Location: 1827-2055 bp Feature: domain Description: GIIM Note: maturase Location: 1 827-2055 bp Feature: domain Description: McrA Location: 2145-2472 bp Feature: domain Description: McrA Location: 21 45-2472 bp Feature: gene Location: 2611-3492 bp Feature: domain Description: InsQ Location: 2614-3490 bp Feature: domain Description: InsQ Location: 261 4-3490 bp Feature: gene Location: 4199-5983 bp Feature: RT Description: RVT_N Location: 4229-4475 bp Feature: RT Description: RVT_N Location: 4229-4475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4517-5210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451 7-521 0 bp Feature: domain Description: GIIM Note: maturase Location: 5315-5543 bp Feature: domain Description: GIIM Note: maturase Location: 531 5-5543 bp Feature: domain Description: McrA Location: 5642-5912 bp Feature: domain Description: McrA Location: 5642-591 2 bp Feature: gene Location: 6016-6267 bp Feature: domain Description: OrfB_Zn_ribbon Location: 6085-6235 bp Feature: domain Description: OrfB_Zn_ribbon Location: 6085-6235 bp Feature: gene Location: 6965-8386 bp Feature: RT Description: RVT_N Location: 6995-7241 bp Feature: RT Description: RVT_N Location: 6995-7241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7283-7976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7283-7976 bp Feature: domain Description: GIIM Note: maturase Location: 8078-8309 bp Feature: domain Description: GIIM Note: maturase Location: 8078-8309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), OrfB_Zn_ribbon (pfam07282)

Seq: MDVL01000476.1 Euhalothece sp. KZN 001 cyano_08_contig_159, whole genome shotgun sequence (17440 bp)
Overview 1 RT 1: 2-4144 bp Neighborhood of RT #1 [2, 4161] RVT-GII GIIM McrA Uma2 GsiA Feature: gene Location: 2-1123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20-236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0-2 36 bp Feature: domain Description: GIIM Note: maturase Location: 335-569 bp Feature: domain Description: GIIM Note: maturase Location: 335-569 bp Feature: domain Description: McrA Location: 704-1022 bp Feature: domain Description: McrA Location: 704-102 2 bp Feature: gene Location: 1503-2243 bp Feature: domain Description: Uma2 Location: 1530-2094 bp Feature: domain Description: Uma2 Location: 1530-2 094 bp Feature: gene Location: 2332-4161 bp Feature: domain Description: GsiA Location: 2341-4144 bp Feature: domain Description: GsiA Location: 2 341-4144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Uma2 (pfam05685), RVT-GII, GIIM (pfam08388), McrA (COG4058), GsiA (COG1123)

Seq: MDVL01000477.1 Euhalothece sp. KZN 001 cyano_08_contig_16, whole genome shotgun sequence (6198 bp)
Overview 1 RT 1: 2-5379 bp Neighborhood of RT #1 [2, 5379] RVT-GII GIIM McrA RRXRR HNHc RVT_N RVT-GII GIIM McrA Feature: gene Location: 2-1084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20-239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20-23 9 bp Feature: domain Description: GIIM Note: maturase Location: 338-572 bp Feature: domain Description: GIIM Note: maturase Location: 3 3 8-572 bp Feature: domain Description: McrA Location: 704-1037 bp Feature: domain Description: McrA Location: 704-103 7 bp Feature: gene Location: 1190-1822 bp Feature: domain Description: RRXRR Location: 1193-1649 bp Feature: domain Description: RRXRR Location: 1193 -1649 bp Feature: domain Description: HNHc Note: nucleases Location: 1670-1793 bp Feature: domain Description: HNHc Note: nucleases Location: 1670-1793 bp Feature: gene Location: 2497-4281 bp Feature: RT Description: RVT_N Location: 2527-2773 bp Feature: RT Description: RVT_N Location: 2527-2773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2815-3508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2815-3 508 bp Feature: domain Description: GIIM Note: maturase Location: 3613-3841 bp Feature: domain Description: GIIM Note: maturase Location: 3 613 -3 841 bp Feature: domain Description: McrA Location: 3931-4207 bp Feature: domain Description: McrA Location: 3 93 1-4207 bp Feature: gene Location: 4347-5009 bp Feature: gene Location: 5035-5379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RRXRR (pfam14239), HNHc (smart00507), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: MDVL01000488.1 Euhalothece sp. KZN 001 cyano_08_contig_17, whole genome shotgun sequence (11831 bp)
Overview 1 RT 1: 1-6356 bp Neighborhood of RT #1 [1, 6373] DUF29 InsQ RVT_N RVT-GII GIIM McrA COG2402 Feature: gene Location: 1-246 bp Feature: domain Description: DUF29 Location: 4-220 bp Feature: domain Description: DUF29 Location: 4 -220 bp Feature: gene Location: 1184-2470 bp Feature: domain Description: InsQ Location: 1193-2348 bp Feature: domain Description: InsQ Location: 1193-234 8 bp Feature: gene Location: 3182-4963 bp Feature: RT Description: RVT_N Location: 3212-3458 bp Feature: RT Description: RVT_N Location: 3212-34 58 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3500-4193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3500-4 193 bp Feature: domain Description: GIIM Note: maturase Location: 4295-4523 bp Feature: domain Description: GIIM Note: maturase Location: 4 295-4 523 bp Feature: domain Description: McrA Location: 4613-4892 bp Feature: domain Description: McrA Location: 4 613-4 892 bp Feature: gene Location: 5321-5536 bp Feature: gene Location: 5963-6373 bp Feature: domain Description: COG2402 Location: 5978-6356 bp Feature: domain Description: COG24 02 Location: 5978-6356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), COG2402 (Predicted nucleic acid-binding protein, contains PIN domain )

Seq: MDVL01000491.1 Euhalothece sp. KZN 001 cyano_08_contig_172, whole genome shotgun sequence (9976 bp)
Overview 1 RT 1: 4515-9934 bp Neighborhood of RT #1 [4515, 9975] YprA YprA RVT-GII GIIM McrA Feature: gene Location: 4515-5186 bp Feature: gene Location: 5245-8862 bp Feature: domain Description: YprA Location: 5596-6397 bp Feature: domain Description: YprA Location: 5 5 96-6397 bp Feature: domain Description: YprA Location: 8347-8686 bp Feature: domain Description: YprA Location: 8347-8686 bp Feature: gene Location: 8893-9975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8914-9130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8914-9130 bp Feature: domain Description: GIIM Note: maturase Location: 9229-9463 bp Feature: domain Description: GIIM Note: maturase Location: 9229-9463 bp Feature: domain Description: McrA Location: 9595-9934 bp Feature: domain Description: McrA Location: 95 95 -9934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YprA (COG1205), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: MDVL01000492.1 Euhalothece sp. KZN 001 cyano_08_contig_173, whole genome shotgun sequence (2765 bp)
Overview 1 RT 1: 1-2716 bp Neighborhood of RT #1 [1, 2763] PqqL AcrR RVT-GII GIIM McrA Feature: gene Location: 1-624 bp Feature: domain Description: PqqL Location: 94-622 bp Feature: domain Description: PqqL Location: 94-6 22 bp Feature: gene Location: 787-1443 bp Feature: domain Description: AcrR Location: 844-1414 bp Feature: domain Description: AcrR Location: 844-1414 bp Feature: gene Location: 1708-2763 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1729-1951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1729-1951 bp Feature: domain Description: GIIM Note: maturase Location: 2050-2284 bp Feature: domain Description: GIIM Note: maturase Location: 2050-2284 bp Feature: domain Description: McrA Location: 2416-2716 bp Feature: domain Description: McrA Location: 2416 -2716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PqqL (COG0612), RVT-GII, GIIM (pfam08388), McrA (COG4058), AcrR (COG1309)

Seq: MDVL01000510.1 Euhalothece sp. KZN 001 cyano_08_contig_19, whole genome shotgun sequence (4721 bp)
Overview 1 RT 1: 2655-4719 bp Neighborhood of RT #1 [2655, 4718] RVT_N RVT-GII GIIM Feature: gene Location: 2655-2930 bp Feature: gene Location: 2963-3253 bp Feature: gene Location: 3429-4718 bp Feature: RT Description: RVT_N Location: 3531-3777 bp Feature: RT Description: RVT_N Location: 3531-37 7 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3819-4491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3819-4491 bp Feature: domain Description: GIIM Note: maturase Location: 4590-4719 bp Feature: domain Description: GIIM Note: maturase Location: 4590-47 19 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MDVL01000522.1 Euhalothece sp. KZN 001 cyano_08_contig_20, whole genome shotgun sequence (12777 bp)
Overview 1 RT 1: 3-6588 bp Neighborhood of RT #1 [3, 6602] UvrD RVT_N RVT-GII GIIM McrA RRXRR HNHc DUF3177 Feature: gene Location: 3-1586 bp Feature: domain Description: UvrD Location: 24-1503 bp Feature: domain Description: UvrD Location: 24-1503 bp Feature: gene Location: 2448-4355 bp Feature: RT Description: RVT_N Location: 2544-2790 bp Feature: RT Description: RVT_N Location: 2544-2790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2832-3510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28 32-3510 bp Feature: domain Description: GIIM Note: maturase Location: 3609-3843 bp Feature: domain Description: GIIM Note: maturase Location: 3609-38 43 bp Feature: domain Description: McrA Location: 3975-4311 bp Feature: domain Description: McrA Location: 3975-4311 bp Feature: gene Location: 4469-5818 bp Feature: domain Description: RRXRR Location: 4529-5048 bp Feature: domain Description: RRXRR Location: 4529-5048 bp Feature: domain Description: HNHc Note: nucleases Location: 5066-5225 bp Feature: domain Description: HNHc Note: nucleases Location: 5066-5225 bp Feature: gene Location: 6000-6602 bp Feature: domain Description: DUF3177 Location: 6024-6588 bp Feature: domain Description: DUF3177 Location: 6024-658 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), UvrD (COG0210), DUF3177 (pfam11375)

Seq: MDVL01000533.1 Euhalothece sp. KZN 001 cyano_08_contig_21, whole genome shotgun sequence (1707 bp)
Overview 1 RT 1: 232-1618 bp Neighborhood of RT #1 [232, 1704] RVT_N RVT-GII GIIM Feature: gene Location: 232-1704 bp Feature: RT Description: RVT_N Location: 328-574 bp Feature: RT Description: RVT_N Location: 328-574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 616-1288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 616-1288 bp Feature: domain Description: GIIM Note: maturase Location: 1384-1618 bp Feature: domain Description: GIIM Note: maturase Location: 1384-1618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MDVL01000544.1 Euhalothece sp. KZN 001 cyano_08_contig_22, whole genome shotgun sequence (15402 bp)
Overview 1 RT 1: 87-3984 bp Neighborhood of RT #1 [87, 3992] RVT_N RVT-GII GIIM McrA PstA HicB Feature: gene Location: 87-257 bp Feature: gene Location: 916-2808 bp Feature: RT Description: RVT_N Location: 1012-1258 bp Feature: RT Description: RVT_N Location: 10 12-1258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1300-1999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1300-1999 bp Feature: domain Description: GIIM Note: maturase Location: 2098-2332 bp Feature: domain Description: GIIM Note: maturase Location: 2098-2332 bp Feature: domain Description: McrA Location: 2467-2770 bp Feature: domain Description: McrA Location: 2467-2770 bp Feature: gene Location: 2998-3681 bp Feature: domain Description: PstA Location: 3004-3649 bp Feature: domain Description: PstA Location: 3004-3649 bp Feature: gene Location: 3774-3992 bp Feature: domain Description: HicB Location: 3777-3984 bp Feature: domain Description: HicB Location: 3777-3984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PstA (COG0581), HicB (pfam05534), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: MDVL01000555.1 Euhalothece sp. KZN 001 cyano_08_contig_23, whole genome shotgun sequence (3471 bp)
Overview 1 RT 1: 231-3206 bp Neighborhood of RT #1 [231, 3232] RVT_N RVT-GII GIIM McrA Uma2 DUF433 Feature: gene Location: 231-2129 bp Feature: RT Description: RVT_N Location: 327-573 bp Feature: RT Description: RVT_N Location: 327-573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 615-1287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 615-1287 bp Feature: domain Description: GIIM Note: maturase Location: 1383-1617 bp Feature: domain Description: GIIM Note: maturase Location: 1383-1617 bp Feature: domain Description: McrA Location: 1749-2097 bp Feature: domain Description: McrA Location: 1749-2097 bp Feature: gene Location: 2313-2972 bp Feature: domain Description: Uma2 Location: 2382-2874 bp Feature: domain Description: Uma2 Location: 2382-2874 bp Feature: gene Location: 3038-3232 bp Feature: domain Description: DUF433 Location: 3056-3206 bp Feature: domain Description: DUF433 Location: 3056-3206 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), Uma2 (pfam05685), DUF433 (pfam04255)

Seq: MDVL01000588.1 Euhalothece sp. KZN 001 cyano_08_contig_26, whole genome shotgun sequence (2569 bp)
Overview 1 RT 1: 215-2467 bp Neighborhood of RT #1 [215, 2568] SlpA PhdYeFM_antitox RVT-GII GIIM McrA Feature: gene Location: 215-646 bp Feature: domain Description: SlpA Location: 227-638 bp Feature: domain Description: SlpA Location: 227-638 bp Feature: gene Location: 670-942 bp Feature: domain Description: PhdYeFM_antitox Location: 685-880 bp Feature: domain Description: PhdYeFM_antitox Location: 685-880 bp Feature: gene Location: 1447-2568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1462-1681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1462-1681 bp Feature: domain Description: GIIM Note: maturase Location: 1780-2014 bp Feature: domain Description: GIIM Note: maturase Location: 1780-2014 bp Feature: domain Description: McrA Location: 2146-2467 bp Feature: domain Description: McrA Location: 2146-2467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), McrA (COG4058), SlpA (COG1047), PhdYeFM_antitox (pfam02604)

Seq: MDVL01000631.1 Euhalothece sp. KZN 001 cyano_08_contig_299, whole genome shotgun sequence (2695 bp)
Overview 1 RT 1: 3-2508 bp Neighborhood of RT #1 [3, 2546] RVT-GII RVT_N RVT-GII GIIM HNHc Feature: gene Location: 3-227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-153 bp Feature: gene Location: 340-495 bp Feature: gene Location: 771-2546 bp Feature: RT Description: RVT_N Location: 864-1110 bp Feature: RT Description: RVT_N Location: 864-1110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1152-1839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1152-1839 bp Feature: domain Description: GIIM Note: maturase Location: 1929-2160 bp Feature: domain Description: GIIM Note: maturase Location: 1929-2160 bp Feature: domain Description: HNHc Note: nucleases Location: 2355-2508 bp Feature: domain Description: HNHc Note: nucleases Location: 2355-2508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655), GIIM (pfam08388), HNHc (smart00507)

Seq: MDVL01000757.1 Euhalothece sp. KZN 001 cyano_08_contig_411, whole genome shotgun sequence (3261 bp)
Overview 1 RT 1: 131-2850 bp Neighborhood of RT #1 [131, 2873] RVT-DGRs STKc_PknB_like Avd_like HicB Feature: gene Location: 131-1195 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 341-980 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 341-980 bp Feature: gene Location: 1192-2307 bp Feature: domain Description: STKc_PknB_like Location: 1246-2008 bp Feature: domain Description: STKc_PknB_like Location: 1246-2008 bp Feature: domain Description: Avd_like Location: 2215-2293 bp Feature: domain Description: Avd_like Location: 2215-2293 bp Feature: gene Location: 2517-2873 bp Feature: domain Description: HicB Location: 2529-2850 bp Feature: domain Description: HicB Location: 2529-2850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), Avd_like (cd16376), RVT-DGRs, HicB (pfam05534)

Seq: MDVL01000766.1 Euhalothece sp. KZN 001 cyano_08_contig_42, whole genome shotgun sequence (2931 bp)
Overview 1 RT 1: 1-1841 bp Neighborhood of RT #1 [1, 1888] RVT_N RVT-GII YiiM Feature: gene Location: 1-801 bp Feature: RT Description: RVT_N Location: 103-349 bp Feature: RT Description: RVT_N Location: 103-349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391-802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391-802 bp Feature: gene Location: 841-1269 bp Feature: gene Location: 1511-1888 bp Feature: domain Description: YiiM Location: 1577-1841 bp Feature: domain Description: YiiM Location: 15 77-1841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YiiM (COG2258), RVT_N (pfam13655), RVT-GII

Seq: MDVL01000821.1 Euhalothece sp. KZN 001 cyano_08_contig_47, whole genome shotgun sequence (11345 bp)
Overview 1 RT 1: 1-4000 bp Neighborhood of RT #1 [1, 4023] RVT_N RVT-GII CtpA FtsQ Feature: gene Location: 1-816 bp Feature: RT Description: RVT_N Location: 97-343 bp Feature: RT Description: RVT_N Location: 97-343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 385-814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 385-814 bp Feature: gene Location: 1776-3083 bp Feature: domain Description: CtpA Location: 1863-3000 bp Feature: domain Description: CtpA Location: 1863-3000 bp Feature: gene Location: 3220-4023 bp Feature: domain Description: FtsQ Location: 3265-4000 bp Feature: domain Description: FtsQ Location: 3265-4000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CtpA (COG0793), RVT_N (pfam13655), RVT-GII

Seq: MDVL01000832.1 Euhalothece sp. KZN 001 cyano_08_contig_48, whole genome shotgun sequence (5015 bp)
Overview 1 RT 1: 2-2741 bp Neighborhood of RT #1 [2, 2755] RVT_N RVT-GII SrkA Feature: gene Location: 2-811 bp Feature: RT Description: RVT_N Location: 98-344 bp Feature: RT Description: RVT_N Location: 98-344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-812 bp Feature: gene Location: 1376-1522 bp Feature: gene Location: 1736-2755 bp Feature: domain Description: SrkA Location: 1886-2741 bp Feature: domain Description: SrkA Location: 1886-2741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SrkA (COG2334), RVT_N (pfam13655), RVT-GII

Seq: MDVL01000843.1 Euhalothece sp. KZN 001 cyano_08_contig_49, whole genome shotgun sequence (4735 bp)
Overview 1 RT 1: 1-2448 bp Neighborhood of RT #1 [1, 2543] RVT-GII RVT_N Cas_DxTHG Feature: gene Location: 1-393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-391 bp Feature: gene Location: 701-877 bp Feature: RT Description: RVT_N Location: 797-866 bp Feature: RT Description: RVT_N Location: 797-866 bp Feature: gene Location: 1806-2543 bp Feature: domain Description: Cas_DxTHG Location: 1809-2448 bp Feature: domain Description: Cas_DxTHG Location: 18 09-2448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Cas_DxTHG (pfam09455), RVT_N (pfam13655)

Seq: MDVL01000863.1 Euhalothece sp. KZN 001 cyano_08_contig_507, whole genome shotgun sequence (3495 bp)
Overview 1 RT 1: 1462-3460 bp Neighborhood of RT #1 [1462, 3492] RVT_N RVT-GII Feature: gene Location: 1462-1731 bp Feature: gene Location: 2046-2255 bp Feature: gene Location: 2404-3492 bp Feature: RT Description: RVT_N Location: 2500-2746 bp Feature: RT Description: RVT_N Location: 2500-2746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2788-3460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2788-3460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: MDVL01000888.1 Euhalothece sp. KZN 001 cyano_08_contig_53, whole genome shotgun sequence (4016 bp)
Overview 1 RT 1: 3-2183 bp Neighborhood of RT #1 [3, 2194] RVT_N RVT-GII RVT_N COG4094 Feature: gene Location: 3-671 bp Feature: RT Description: RVT_N Location: 45-219 bp Feature: RT Description: RVT_N Location: 45-219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261-672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261-672 bp Feature: gene Location: 622-804 bp Feature: RT Description: RVT_N Location: 724-793 bp Feature: RT Description: RVT_N Location: 724-793 bp Feature: gene Location: 1487-2194 bp Feature: domain Description: COG4094 Location: 1523-2183 bp Feature: domain Description: COG4094 Location: 1523-2183 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4094 (Uncharacterized membrane protein ), RVT_N (pfam13655), RVT-GII

Seq: MDVL01000910.1 Euhalothece sp. KZN 001 cyano_08_contig_55, whole genome shotgun sequence (7288 bp)
Overview 1 RT 1: 556-3892 bp Neighborhood of RT #1 [556, 3909] RVT_N RVT-GII GIIM HNHc LplA T3SC_YbjN-like_1 Feature: gene Location: 556-2268 bp Feature: RT Description: RVT_N Location: 604-850 bp Feature: RT Description: RVT_N Location: 604-850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898-1582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898-1582 bp Feature: domain Description: GIIM Note: maturase Location: 1654-1888 bp Feature: domain Description: GIIM Note: maturase Location: 1654-1888 bp Feature: domain Description: HNHc Note: nucleases Location: 2101-2260 bp Feature: domain Description: HNHc Note: nucleases Location: 21 01-2260 bp Feature: gene Location: 2697-3371 bp Feature: domain Description: LplA Location: 2700-3273 bp Feature: domain Description: LplA Location: 2700-3273 bp Feature: gene Location: 3421-3909 bp Feature: domain Description: T3SC_YbjN-like_1 Location: 3514-3892 bp Feature: domain Description: T3SC_YbjN-like_1 Location: 3514-3892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LplA (COG0095), T3SC_YbjN-like_1 (cd17036), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: MDVL01000943.1 Euhalothece sp. KZN 001 cyano_08_contig_58, whole genome shotgun sequence (8406 bp)
Overview 1 RT 1: 210-4673 bp Neighborhood of RT #1 [210, 4747] CP12 RhaT RVT_N RVT-GII HNHc OmpR Feature: gene Location: 210-434 bp Feature: domain Description: CP12 Location: 222-429 bp Feature: domain Description: CP12 Location: 22 2-429 bp Feature: gene Location: 515-1519 bp Feature: domain Description: RhaT Location: 518-1400 bp Feature: domain Description: RhaT Location: 518-1400 bp Feature: gene Location: 2169-3017 bp Feature: RT Description: RVT_N Location: 2217-2463 bp Feature: RT Description: RVT_N Location: 22 17-2463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2511-2976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2511-2976 bp Feature: gene Location: 3423-3881 bp Feature: domain Description: HNHc Note: nucleases Location: 3720-3873 bp Feature: domain Description: HNHc Note: nucleases Location: 3720-3873 bp Feature: gene Location: 4001-4747 bp Feature: domain Description: OmpR Location: 4019-4673 bp Feature: domain Description: OmpR Location: 4019-4673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CP12 (smart01093), RVT_N (pfam13655), RVT-GII, HNHc (smart00507), OmpR (COG0745), RhaT (TIGR00776)

Seq: MDVL01001187.1 Euhalothece sp. KZN 001 cyano_08_contig_8, whole genome shotgun sequence (14096 bp)
Overview 1 RT 1: 2514-10934 bp Neighborhood of RT #1 [2514, 10966] pyrB PRK14457 RVT_N RVT-GII GIIM McrA RVT_N RVT-GII GIIM McrA InsQ Feature: gene Location: 2514-3494 bp Feature: domain Description: pyrB Location: 2523-3483 bp Feature: domain Description: pyrB Location: 2523 -3483 bp Feature: gene Location: 3491-4510 bp Feature: domain Description: PRK14457 Location: 3506-4505 bp Feature: domain Description: PRK14457 Location: 3506-4505 bp Feature: gene Location: 4979-6763 bp Feature: RT Description: RVT_N Location: 5009-5255 bp Feature: RT Description: RVT_N Location: 5009-5255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5297-5990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5297-5990 bp Feature: domain Description: GIIM Note: maturase Location: 6092-6323 bp Feature: domain Description: GIIM Note: maturase Location: 6092-6323 bp Feature: domain Description: McrA Location: 6413-6719 bp Feature: domain Description: McrA Location: 6413-6719 bp Feature: gene Location: 7731-9515 bp Feature: RT Description: RVT_N Location: 7764-8010 bp Feature: RT Description: RVT_N Location: 7764-8010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8052-8745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8052-8745 bp Feature: domain Description: GIIM Note: maturase Location: 8844-9075 bp Feature: domain Description: GIIM Note: maturase Location: 8844-9075 bp Feature: domain Description: McrA Location: 9165-9438 bp Feature: domain Description: McrA Location: 9165-9438 bp Feature: gene Location: 9558-9689 bp Feature: gene Location: 10190-10966 bp Feature: domain Description: InsQ Location: 10193-10934 bp Feature: domain Description: InsQ Location: 10193-10934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pyrB (PRK13814), PRK14457 (23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: MDVL01001321.1 Euhalothece sp. KZN 001 cyano_08_contig_92, whole genome shotgun sequence (3949 bp)
Overview 1 RT 1: 1-3806 bp Neighborhood of RT #1 [1, 3862] T_den_put_tspse T_den_put_tspse RVT_N RVT-GII GIIM HNHc T_den_put_tspse Feature: gene Location: 1-165 bp Feature: domain Description: T_den_put_tspse Location: 28-166 bp Feature: domain Description: T_den_put_tspse Location: 28-166 bp Feature: gene Location: 211-1080 bp Feature: domain Description: T_den_put_tspse Location: 781-1051 bp Feature: domain Description: T_den_put_tspse Location: 781-1051 bp Feature: gene Location: 1934-3589 bp Feature: RT Description: RVT_N Location: 1985-2228 bp Feature: RT Description: RVT_N Location: 1985-2228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2270-2894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2270-2894 bp Feature: domain Description: GIIM Note: maturase Location: 2951-3179 bp Feature: domain Description: GIIM Note: maturase Location: 2951-3179 bp Feature: domain Description: HNHc Note: nucleases Location: 3422-3563 bp Feature: domain Description: HNHc Note: nucleases Location: 3422-3563 bp Feature: gene Location: 3635-3862 bp Feature: domain Description: T_den_put_tspse Location: 3668-3806 bp Feature: domain Description: T_den_put_tspse Location: 3668-3806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: MDVL01001351.1 Euhalothece sp. KZN 001 cyano_08_contig_947, whole genome shotgun sequence (1634 bp)
Overview 1 RT 1: 142-1468 bp Neighborhood of RT #1 [142, 1563] RVT-GII GIIM Feature: gene Location: 142-1563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 529-1174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 529-1174 bp Feature: domain Description: GIIM Note: maturase Location: 1252-1468 bp Feature: domain Description: GIIM Note: maturase Location: 125 2-1468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)