myRT

myRT report for GCA_002901285.1_ASM290128v1

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Seq: PPHL01000063.1 Escherichia coli strain REP237 NODE_109_length_2320_cov_179.979, whole genome shotgun sequence (2320 bp)
Overview 1 RT 1: 26-1969 bp Neighborhood of RT #1 [26, 2214] RVT-GII GIIM Feature: gene Location: 26-397 bp Feature: gene Location: 691-2214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 964-1696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 964-1 696 bp Feature: domain Description: GIIM Note: maturase Location: 1771-1969 bp Feature: domain Description: GIIM Note: maturase Location: 1 771 -1 969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PPHL01000165.1 Escherichia coli strain REP237 NODE_7_length_166704_cov_15.2041, whole genome shotgun sequence (166704 bp)
Overview 1 RT 1: 137924-143955 bp Neighborhood of RT #1 [137924, 143955] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 137924-138844 bp Feature: domain Description: AbiEii Location: 137966-138707 bp Feature: domain Description: AbiEii Location: 137966-138707 bp Feature: gene Location: 138831-139634 bp Feature: domain Description: AbiEi_3_N Location: 138864-139125 bp Feature: domain Description: AbiEi_3_N Location: 138864-13912 5 bp Feature: domain Description: AbiEi_3 Location: 139137-139593 bp Feature: domain Description: AbiEi_3 Location: 139137-139593 bp Feature: gene Location: 139929-143138 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 140457-140946 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 140457-140946 bp Feature: domain Description: nitrilase Location: 142452-143049 bp Feature: domain Description: nitrilase Location: 142 452 -143049 bp Feature: gene Location: 143299-143439 bp Feature: domain Description: Phage_ASH Location: 143326-143419 bp Feature: domain Description: Phage_ASH Location: 14332 6-143419 bp Feature: gene Location: 143485-143955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)