myRT

myRT report for GCA_002902385.1_ASM290238v1

Download annotations/find similar RTs

Seq: PPQH01000019.1 Staphylococcus intermedius NCTC 11048 0e0703f8-94f4-4870-9a0b-098e61fd3cd2_c19, whole genome shotgun sequence (30597 bp)
Overview 1 RT 1: 247-5644 bp Neighborhood of RT #1 [247, 5646] WcaG Coagulase RVT-GII GIIM PRK13036 Feature: gene Location: 247-1098 bp Feature: domain Description: WcaG Location: 250-1027 bp Feature: domain Description: WcaG Location: 250-1 027 bp Feature: gene Location: 1380-2876 bp Feature: domain Description: Coagulase Location: 1521-2169 bp Feature: domain Description: Coagulase Location: 1 521 -21 69 bp Feature: gene Location: 2970-4265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3195-3810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 95-381 0 bp Feature: domain Description: GIIM Note: maturase Location: 3873-4101 bp Feature: domain Description: GIIM Note: maturase Location: 3873-41 01 bp Feature: gene Location: 4368-4526 bp Feature: gene Location: 4942-5646 bp Feature: domain Description: PRK13036 Location: 4945-5644 bp Feature: domain Description: PRK1 3036 Location: 4945-5644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Coagulase (pfam08764), WcaG (COG0451), RVT-GII, GIIM (pfam08388), PRK13036 (superantigen-like protein SSL11; Reviewed)

Seq: PPQH01000040.1 Staphylococcus intermedius NCTC 11048 0e0703f8-94f4-4870-9a0b-098e61fd3cd2_c40, whole genome shotgun sequence (241847 bp)
Overview 1 RT 1: 50133-57500 bp Neighborhood of RT #1 [50133, 57511] Acetyltransf_1 PRK04319 RVT-GII GIIM PRK13505 MrcB Feature: gene Location: 50133-50765 bp Feature: domain Description: Acetyltransf_1 Location: 50277-50487 bp Feature: domain Description: Acetyltransf_1 Location: 502 77-50487 bp Feature: gene Location: 50884-52641 bp Feature: domain Description: PRK04319 Location: 50935-52639 bp Feature: domain Description: PRK04319 Location: 50935-52 639 bp Feature: gene Location: 53188-54483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53413-54028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53413-5402 8 bp Feature: domain Description: GIIM Note: maturase Location: 54088-54319 bp Feature: domain Description: GIIM Note: maturase Location: 54088-54319 bp Feature: gene Location: 54776-56452 bp Feature: domain Description: PRK13505 Location: 54797-56450 bp Feature: domain Description: PRK13505 Location: 54797-56450 bp Feature: gene Location: 56615-57511 bp Feature: domain Description: MrcB Location: 56672-57500 bp Feature: domain Description: MrcB Location: 56672 -57500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), PRK04319 (acetyl-CoA synthetase; Provisional), RVT-GII, GIIM (pfam08388), PRK13505 (formate--tetrahydrofolate ligase; Provisional), MrcB (COG0744)