myRT

myRT report for GCA_002902635.1_ASM290263v1

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Seq: PPRJ01000136.1 Staphylococcus microti strain DSM 22147 c7e22946-4813-4895-9c02-81160a8d6eef_c143, whole genome shotgun sequence (3751 bp)
Overview 1 RT 1: 421-3588 bp Neighborhood of RT #1 [421, 3749] PRK14201 DDE_Tnp_1_6 RVT-GII GIIM Feature: gene Location: 421-786 bp Feature: domain Description: PRK14201 Location: 424-778 bp Feature: domain Description: PRK1 4201 Location: 424-778 bp Feature: gene Location: 1445-2185 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1787-2138 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 787-21 38 bp Feature: gene Location: 2931-3749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2940-3294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2940-3294 bp Feature: domain Description: GIIM Note: maturase Location: 3354-3588 bp Feature: domain Description: GIIM Note: maturase Location: 3354-3588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_6 (pfam13751), RVT-GII, GIIM (pfam08388), PRK14201 (fluoride efflux transporter CrcB)

Seq: PPRJ01000140.1 Staphylococcus microti strain DSM 22147 c7e22946-4813-4895-9c02-81160a8d6eef_c147, whole genome shotgun sequence (216 bp)
Overview 1 RT 1: 3-216 bp Neighborhood of RT #1 [3, 215] RVT-GII Feature: gene Location: 3-215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78-216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78-2 16 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PPRJ01000146.1 Staphylococcus microti strain DSM 22147 c7e22946-4813-4895-9c02-81160a8d6eef_c153, whole genome shotgun sequence (2730 bp)
Overview 1 RT 1: 3-2231 bp Neighborhood of RT #1 [3, 2272] RVT-GII GIIM DDE_Tnp_1_6 COG3666 Feature: gene Location: 3-896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-3 84 bp Feature: domain Description: GIIM Note: maturase Location: 447-678 bp Feature: domain Description: GIIM Note: maturase Location: 447-678 bp Feature: gene Location: 1137-1790 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1560-1773 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1560-1773 bp Feature: gene Location: 1838-2272 bp Feature: domain Description: COG3666 Location: 1841-2231 bp Feature: domain Description: COG3 666 Location: 1841-223 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_6 (pfam13751), COG3666 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: PPRJ01000159.1 Staphylococcus microti strain DSM 22147 c7e22946-4813-4895-9c02-81160a8d6eef_c170, whole genome shotgun sequence (11517 bp)
Overview 1 RT 1: 3-1646 bp Neighborhood of RT #1 [3, 2023] RVT-GII NERD Feature: gene Location: 3-569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 228-558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 228-558 bp Feature: gene Location: 687-815 bp Feature: gene Location: 1112-2023 bp Feature: domain Description: NERD Location: 1457-1646 bp Feature: domain Description: NERD Location: 14 57-164 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NERD (pfam08378), RVT-GII

Seq: PPRJ01000164.1 Staphylococcus microti strain DSM 22147 c7e22946-4813-4895-9c02-81160a8d6eef_c175, whole genome shotgun sequence (204 bp)
Overview 1 RT 1: 3-201 bp Neighborhood of RT #1 [3, 203] RVT-GII Feature: gene Location: 3-203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PPRJ01000066.1 Staphylococcus microti strain DSM 22147 c7e22946-4813-4895-9c02-81160a8d6eef_c68, whole genome shotgun sequence (204 bp)
Overview 1 RT 1: 2-200 bp Neighborhood of RT #1 [2, 202] RVT-GII Feature: gene Location: 2-202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII