myRT

myRT report for GCA_002903245.1_ASM290324v1

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Seq: PDFS01000024.1 Vibrio vulnificus strain SREL214 NODE_126_length_395_cov_0.0168919_ID_9388, whole genome shotgun sequence (395 bp)
Overview 1 RT 1: 1-394 bp Neighborhood of RT #1 [1, 393] RVT-CRISPR-like Feature: gene Location: 1-393 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 16-394 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 6-394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: PDFS01000164.1 Vibrio vulnificus strain SREL214 NODE_13_length_110628_cov_1.82548_ID_9162, whole genome shotgun sequence (110628 bp)
Overview 1 RT 1: 107161-110606 bp Neighborhood of RT #1 [107161, 110626] PRK06101 SnoaL_2 RVT-GII GIIM PHA02517 Feature: gene Location: 107161-107886 bp Feature: domain Description: PRK06101 Location: 107164-107878 bp Feature: domain Description: PRK06101 Location: 107164-107878 bp Feature: gene Location: 107883-108302 bp Feature: domain Description: SnoaL_2 Location: 107907-108207 bp Feature: domain Description: SnoaL_2 Location: 107907-1082 07 bp Feature: gene Location: 108473-109717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108623-109232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10862 3-1092 32 bp Feature: domain Description: GIIM Note: maturase Location: 109289-109493 bp Feature: domain Description: GIIM Note: maturase Location: 1092 89-109493 bp Feature: gene Location: 109742-110626 bp Feature: domain Description: PHA02517 Location: 109811-110606 bp Feature: domain Description: PHA02 517 Location: 109811-110606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06101 (SDR family oxidoreductase), SnoaL_2 (pfam12680), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: PDFS01000065.1 Vibrio vulnificus strain SREL214 NODE_3_length_337507_cov_1.81777_ID_9142, whole genome shotgun sequence (337507 bp)
Overview 1 RT 1: 336457-337408 bp Neighborhood of RT #1 [336457, 337422] RVT-GII Feature: gene Location: 336457-336627 bp Feature: gene Location: 336643-336780 bp Feature: gene Location: 336931-337422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 337075-337408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 7075-3 3 7408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PDFS01000141.1 Vibrio vulnificus strain SREL214 NODE_64_length_3384_cov_1.76621_ID_9266, whole genome shotgun sequence (3384 bp)
Overview 1 RT 1: 309-3333 bp Neighborhood of RT #1 [309, 3371] RVT-UG7 OMP_b-brl FIN Feature: gene Location: 309-1823 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 681-1107 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 681-1107 bp Feature: gene Location: 2033-2617 bp Feature: domain Description: OMP_b-brl Location: 2057-2522 bp Feature: domain Description: OMP_b-brl Location: 2057-2522 bp Feature: gene Location: 2739-3371 bp Feature: domain Description: FIN Location: 2928-3333 bp Feature: domain Description: FIN Location: 2928-3333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, OMP_b-brl (pfam13505), FIN (cd16389)

Seq: PDFS01000084.1 Vibrio vulnificus strain SREL214 NODE_75_length_2339_cov_1.88125_ID_9288, whole genome shotgun sequence (2339 bp)
Overview 1 RT 1: 181-1860 bp Neighborhood of RT #1 [181, 1862] RVT-GII GIIM integrase_gron Feature: gene Location: 181-819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184-364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184-364 bp Feature: domain Description: GIIM Note: maturase Location: 421-640 bp Feature: domain Description: GIIM Note: maturase Location: 421-640 bp Feature: gene Location: 900-1862 bp Feature: domain Description: integrase_gron Location: 915-1860 bp Feature: domain Description: integrase_gron Location: 915 -1860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), integrase_gron (TIGR02249)