myRT

myRT report for GCA_002903265.1_ASM290326v1

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Seq: PDFT01000193.1 Vibrio vulnificus strain SREL119 NODE_110_length_805_cov_0.0325779_ID_15793, whole genome shotgun sequence (805 bp)
Overview 1 RT 1: 2-791 bp Neighborhood of RT #1 [2, 802] RVT-GII Feature: gene Location: 2-802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173-791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 73-791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PDFT01000037.1 Vibrio vulnificus strain SREL119 NODE_3_length_355656_cov_5.60877_ID_15579, whole genome shotgun sequence (355656 bp)
Overview 1 RT 1: 104247-109116 bp Neighborhood of RT #1 [104247, 109496] RVT-GII GIIM Usp COG4666 Feature: gene Location: 104247-104618 bp Feature: gene Location: 104630-104785 bp Feature: gene Location: 105088-106302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105232-105853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1052 32 -105853 bp Feature: domain Description: GIIM Note: maturase Location: 105904-106117 bp Feature: domain Description: GIIM Note: maturase Location: 105904-106117 bp Feature: gene Location: 106401-106838 bp Feature: domain Description: Usp Location: 106404-106827 bp Feature: domain Description: Usp Location: 106404-10682 7 bp Feature: gene Location: 106917-109496 bp Feature: domain Description: COG4666 Location: 106941-109116 bp Feature: domain Description: COG4666 Location: 106941-109116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Usp (pfam00582), COG4666 (TRAP-type uncharacterized transport system, fused permease components )

Seq: PDFT01000321.1 Vibrio vulnificus strain SREL119 NODE_66_length_2068_cov_0.015752_ID_15705, whole genome shotgun sequence (2068 bp)
Overview 1 RT 1: 3-2064 bp Neighborhood of RT #1 [3, 2066] RVT-GII RT_nLTR_like Feature: gene Location: 3-1457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-462 bp Feature: gene Location: 1590-2066 bp Feature: domain Description: RT_nLTR_like Location: 1953-2064 bp Feature: domain Description: RT_nLTR_like Location: 1953 -2064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RT_nLTR_like (cd01650), RVT-GII