myRT

myRT report for GCA_002903645.1_ASM290364v1

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Seq: PDGP01000129.1 Vibrio vulnificus strain 106-2A NODE_20_length_83326_cov_8.27669_ID_9498, whole genome shotgun sequence (83326 bp)
Overview 1 RT 1: 38811-43779 bp Neighborhood of RT #1 [38811, 43916] LolD PRK07883 RVT-Retrons Ntn_CGH Feature: gene Location: 38811-39503 bp Feature: domain Description: LolD Location: 38832-39489 bp Feature: domain Description: LolD Location: 38832-39489 bp Feature: gene Location: 39543-40157 bp Feature: domain Description: PRK07883 Location: 39561-40077 bp Feature: domain Description: PRK07883 Location: 39561 -40077 bp Feature: gene Location: 40731-41903 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40875-41448 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40875-41 448 bp Feature: gene Location: 41903-42625 bp Feature: gene Location: 42861-43916 bp Feature: domain Description: Ntn_CGH Location: 42870-43779 bp Feature: domain Description: Ntn_CGH Location: 42870-43779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LolD (COG1136), PRK07883 (DEDD exonuclease domain-containing protein), RVT-Retrons, Ntn_CGH (cd01902)

Seq: PDGP01000055.1 Vibrio vulnificus strain 106-2A NODE_9_length_184489_cov_7.53038_ID_9476, whole genome shotgun sequence (184489 bp)
Overview 1 RT 1: 61381-67808 bp Neighborhood of RT #1 [61381, 67816] SLATT_5 RVT-UG17 PRK05367 PRK01202 Feature: gene Location: 61381-61833 bp Feature: gene Location: 62364-62930 bp Feature: domain Description: SLATT_5 Location: 62373-62904 bp Feature: domain Description: SLATT_5 Location: 62 373-62 904 bp Feature: gene Location: 62930-64264 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 63152-63734 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 63152 -63734 bp Feature: gene Location: 64467-67331 bp Feature: domain Description: PRK05367 Location: 64488-67326 bp Feature: domain Description: PRK05367 Location: 64488-6732 6 bp Feature: gene Location: 67436-67816 bp Feature: domain Description: PRK01202 Location: 67442-67808 bp Feature: domain Description: PRK012 02 Location: 67442 -67808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, PRK05367 (aminomethyl-transferring glycine dehydrogenase), PRK01202 (glycine cleavage system protein GcvH)