myRT

myRT report for GCA_002904165.1_ASM290416v1

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Seq: CVTD020000009.1 Herbinix hemicellulosilytica genome assembly TUM3/55, contig 02_T3/55T_contig9, whole genome shotgun sequence (17268 bp)
Overview 1 RT 1: 14646-16689 bp Neighborhood of RT #1 [14646, 16748] RVT-GII GIIM Feature: gene Location: 14646-14957 bp Feature: gene Location: 15207-15434 bp Feature: gene Location: 15444-16748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15750-16386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5750-1 6386 bp Feature: domain Description: GIIM Note: maturase Location: 16467-16689 bp Feature: domain Description: GIIM Note: maturase Location: 1 6467-1 6689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CVTD020000010.1 Herbinix hemicellulosilytica genome assembly TUM3/55, contig 02_T3/55T_contig10, whole genome shotgun sequence (257198 bp)
Overview 1 RT 1: 13288-20606 bp Neighborhood of RT #1 [13288, 20668] arsen_driv_ArsA LMWP_ArsC RVT-GII GIIM SSL2 Feature: gene Location: 13288-15024 bp Feature: domain Description: arsen_driv_ArsA Location: 13321-14989 bp Feature: domain Description: arsen_driv_ArsA Location: 1332 1-14989 bp Feature: gene Location: 15035-15424 bp Feature: domain Description: LMWP_ArsC Location: 15044-15407 bp Feature: domain Description: LMWP_ArsC Location: 15044-15407 bp Feature: gene Location: 16120-17418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16420-17056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1642 0-17056 bp Feature: domain Description: GIIM Note: maturase Location: 17137-17359 bp Feature: domain Description: GIIM Note: maturase Location: 17137-17359 bp Feature: gene Location: 17726-17872 bp Feature: gene Location: 18920-20668 bp Feature: domain Description: SSL2 Location: 19400-20606 bp Feature: domain Description: SSL2 Location: 19400-2 0606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT arsen_driv_ArsA (TIGR04291), LMWP_ArsC (cd16345), RVT-GII, GIIM (pfam08388), SSL2 (COG1061)

Seq: CVTD020000019.1 Herbinix hemicellulosilytica genome assembly TUM3/55, contig 02_T3/55T_contig19, whole genome shotgun sequence (28480 bp)
Overview 1 RT 1: 22463-27192 bp Neighborhood of RT #1 [22463, 27192] Spr RVT-GII HNHc Feature: gene Location: 22463-24211 bp Feature: domain Description: Spr Location: 23846-24185 bp Feature: domain Description: Spr Location: 23 846-24185 bp Feature: gene Location: 24218-24436 bp Feature: gene Location: 24616-26499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24952-25669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24952-25669 bp Feature: domain Description: HNHc Note: nucleases Location: 26251-26389 bp Feature: domain Description: HNHc Note: nucleases Location: 26251-263 89 bp Feature: gene Location: 26698-26946 bp Feature: gene Location: 26956-27192 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Spr (COG0791), RVT-GII, HNHc (smart00507)