myRT

myRT report for GCA_002909035.1_ASM290903v1

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Seq: PPVD01000008.1 Pseudomonas fluorescens strain PL5.4 NODE_8_length_73067_cov_0.472895, whole genome shotgun sequence (73067 bp)
Overview 1 RT 1: 47652-52903 bp Neighborhood of RT #1 [47652, 52923] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66_C ACR3 Feature: gene Location: 47652-47987 bp Feature: domain Description: TnpB_IS66 Location: 47670-47958 bp Feature: domain Description: TnpB_IS66 Location: 47670-47958 bp Feature: gene Location: 48049-49377 bp Feature: domain Description: LZ_Tnp_IS66 Location: 48181-48388 bp Feature: domain Description: LZ_Tnp_IS66 Location: 481 81 -48388 bp Feature: domain Description: zf-IS66 Location: 48427-48541 bp Feature: domain Description: zf-IS66 Location: 48427-48541 bp Feature: domain Description: DDE_Tnp_IS66 Location: 48583-49357 bp Feature: domain Description: DDE_Tnp_IS66 Location: 48583-49357 bp Feature: gene Location: 49935-51596 bp Feature: RT Description: RVT_N Location: 49980-50223 bp Feature: RT Description: RVT_N Location: 49980-50223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50268-50904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50268-50904 bp Feature: domain Description: GIIM Note: maturase Location: 50961-51189 bp Feature: domain Description: GIIM Note: maturase Location: 50961 -51 1 89 bp Feature: gene Location: 51788-51922 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 51794-51905 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 51 794-51 905 bp Feature: gene Location: 51961-52923 bp Feature: domain Description: ACR3 Location: 51976-52903 bp Feature: domain Description: ACR3 Location: 51 976-52903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), ACR3 (COG0798)