myRT

myRT report for GCA_002909205.1_ASM290920v1

Download annotations/find similar RTs

Seq: MKZP01000002.1 Bacillus mycoides strain GM5LP BAWEI_contig000002, whole genome shotgun sequence (516891 bp)
Overview 1 RT 1: 58976-67262 bp Neighborhood of RT #1 [58976, 67270] InsE PHA02517 AE_Prim_S_like RVT-UG10 PRK00024 DUF960 Feature: gene Location: 58976-59332 bp Feature: domain Description: InsE Location: 59036-59195 bp Feature: domain Description: InsE Location: 59036-591 95 bp Feature: gene Location: 59498-60205 bp Feature: domain Description: PHA02517 Location: 59504-60185 bp Feature: domain Description: PHA0251 7 Location: 59504-601 85 bp Feature: gene Location: 60330-65636 bp Feature: domain Description: AE_Prim_S_like Location: 60411-60924 bp Feature: domain Description: AE_Prim_S_like Location: 6041 1 -60924 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 61686-62307 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 61 686-62307 bp Feature: gene Location: 66394-66900 bp Feature: domain Description: PRK00024 Location: 66490-66895 bp Feature: domain Description: PRK00024 Location: 66490-66895 bp Feature: gene Location: 66953-67270 bp Feature: domain Description: DUF960 Location: 66974-67262 bp Feature: domain Description: DUF960 Location: 66974-67262 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), AE_Prim_S_like (cl01287), RVT-UG10, PRK00024 (DNA repair protein RadC), DUF960 (pfam06124)

Seq: MKZP01000049.1 Bacillus mycoides strain GM5LP BAWEI_contig000049, whole genome shotgun sequence (20019 bp)
Overview 1 RT 1: 5898-8929 bp Neighborhood of RT #1 [5898, 8952] DUF3991 Toprim_2 RVT-GII WXG100_ESAT6 Feature: gene Location: 5898-6875 bp Feature: domain Description: DUF3991 Location: 6261-6462 bp Feature: domain Description: DUF3991 Location: 62 61-6462 bp Feature: domain Description: Toprim_2 Location: 6525-6783 bp Feature: domain Description: Toprim_2 Location: 652 5-6783 bp Feature: gene Location: 6953-7141 bp Feature: gene Location: 7601-8197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7865-8186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7865-8186 bp Feature: gene Location: 8222-8518 bp Feature: gene Location: 8656-8952 bp Feature: domain Description: WXG100_ESAT6 Location: 8668-8929 bp Feature: domain Description: WXG100_ESAT6 Location: 8668-892 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3991 (pfam13154), Toprim_2 (pfam13155), RVT-GII, WXG100_ESAT6 (TIGR03930)