myRT

myRT report for GCA_002911745.1_ASM291174v1

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Seq: PGDR01000004.1 Bacillus thuringiensis serovar japonensis strain Buibui 51639, whole genome shotgun sequence (31634 bp)
Overview 1 RT 1: 20694-26777 bp Neighborhood of RT #1 [20694, 26806] RVT-GII DUF3854 Feature: gene Location: 20694-20957 bp Feature: gene Location: 21026-21430 bp Feature: gene Location: 22643-24574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22964-23699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22964-23699 bp Feature: gene Location: 24755-25300 bp Feature: gene Location: 25493-26806 bp Feature: domain Description: DUF3854 Location: 26438-26777 bp Feature: domain Description: DUF3854 Location: 26438-26777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF3854 (pfam12965)

Seq: PGDR01000038.1 Bacillus thuringiensis serovar japonensis strain Buibui 51673, whole genome shotgun sequence (2548 bp)
Overview 1 RT 1: 628-2416 bp Neighborhood of RT #1 [628, 2445] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 628-2445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898-1720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898-172 0 bp Feature: domain Description: Intron_maturas2 Location: 1801-2095 bp Feature: domain Description: Intron_maturas2 Location: 1801-2 095 bp Feature: domain Description: HNHc Note: nucleases Location: 2242-2416 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 42 -2 416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: PGDR01000081.1 Bacillus thuringiensis serovar japonensis strain Buibui 51717, whole genome shotgun sequence (2610 bp)
Overview 1 RT 1: 711-2376 bp Neighborhood of RT #1 [711, 2501] RVT-GII HNHc Feature: gene Location: 711-2501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1008-1704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1008-1704 bp Feature: domain Description: HNHc Note: nucleases Location: 2244-2376 bp Feature: domain Description: HNHc Note: nucleases Location: 2244-23 76 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: PGDR01000105.1 Bacillus thuringiensis serovar japonensis strain Buibui 51741, whole genome shotgun sequence (10635 bp)
Overview 1 RT 1: 64-6159 bp Neighborhood of RT #1 [64, 9401] NlpD Spr RVT-GII Intron_maturas2 HNHc CwlT_like TrbL Feature: gene Location: 64-639 bp Feature: gene Location: 656-1534 bp Feature: domain Description: NlpD Location: 680-1103 bp Feature: domain Description: NlpD Location: 680-1103 bp Feature: domain Description: Spr Location: 1142-1475 bp Feature: domain Description: Spr Location: 114 2-14 75 bp Feature: gene Location: 1685-3508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1949-2783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194 9-2783 bp Feature: domain Description: Intron_maturas2 Location: 2852-3188 bp Feature: domain Description: Intron_maturas2 Location: 2852-3188 bp Feature: domain Description: HNHc Note: nucleases Location: 3329-3482 bp Feature: domain Description: HNHc Note: nucleases Location: 3329-34 82 bp Feature: gene Location: 4081-5385 bp Feature: domain Description: CwlT_like Location: 4933-5374 bp Feature: domain Description: CwlT_like Location: 4 933-5374 bp Feature: gene Location: 5382-9401 bp Feature: domain Description: TrbL Location: 5676-6159 bp Feature: domain Description: TrbL Location: 5676-6159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlT_like, TrbL (pfam04610), NlpD (COG0739), Spr (COG0791)

Seq: PGDR01000144.1 Bacillus thuringiensis serovar japonensis strain Buibui 51780, whole genome shotgun sequence (12685 bp)
Overview 1 RT 1: 7243-12329 bp Neighborhood of RT #1 [7243, 12604] RVT_N RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 7243-7386 bp Feature: gene Location: 7533-8087 bp Feature: gene Location: 9201-10862 bp Feature: RT Description: RVT_N Location: 9249-9495 bp Feature: RT Description: RVT_N Location: 9249-9495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9549-10209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95 49-10209 bp Feature: domain Description: GIIM Note: maturase Location: 10278-10509 bp Feature: domain Description: GIIM Note: maturase Location: 10278-105 09 bp Feature: gene Location: 11174-12604 bp Feature: domain Description: DDE_Tnp_1 Location: 11534-12329 bp Feature: domain Description: DDE_Tnp_1 Location: 115 34-12329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: PGDR01000145.1 Bacillus thuringiensis serovar japonensis strain Buibui 51781, whole genome shotgun sequence (2723 bp)
Overview 1 RT 1: 756-2469 bp Neighborhood of RT #1 [756, 2585] RVT-GII HNHc Feature: gene Location: 756-2585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1056-1758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1056 -1758 bp Feature: domain Description: HNHc Note: nucleases Location: 2337-2469 bp Feature: domain Description: HNHc Note: nucleases Location: 2337-246 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: PGDR01000159.1 Bacillus thuringiensis serovar japonensis strain Buibui 51795, whole genome shotgun sequence (9671 bp)
Overview 1 RT 1: 2-4161 bp Neighborhood of RT #1 [2, 4161] HTH_ARSR PRK03113 RVT-GII Feature: gene Location: 2-262 bp Feature: domain Description: HTH_ARSR Location: 119-254 bp Feature: domain Description: HTH_ARSR Location: 119-254 bp Feature: gene Location: 277-711 bp Feature: domain Description: PRK03113 Location: 292-664 bp Feature: domain Description: PRK03113 Location: 292-664 bp Feature: gene Location: 954-2861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1254-1965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1254-1965 bp Feature: gene Location: 3648-3884 bp Feature: gene Location: 3961-4161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), RVT-GII