myRT

myRT report for GCA_002911795.1_ASM291179v1

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Seq: PGDT01000023.1 Bacillus thuringiensis serovar medellin strain NRRL 23135 50572, whole genome shotgun sequence (51079 bp)
Overview 1 RT 1: 38057-42435 bp Neighborhood of RT #1 [38057, 43205] HTH_45 RVT-Retrons PRK06930 Peptidases_S8_Subtilisin_like_2 Feature: gene Location: 38057-38401 bp Feature: domain Description: HTH_45 Location: 38069-38264 bp Feature: domain Description: HTH_45 Location: 38069-38264 bp Feature: gene Location: 38448-38669 bp Feature: gene Location: 38685-39668 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38871-39426 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38871 -39426 bp Feature: gene Location: 39703-40218 bp Feature: domain Description: PRK06930 Location: 39706-40198 bp Feature: domain Description: PRK06930 Location: 39706-401 98 bp Feature: gene Location: 40887-43205 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 41640-42435 bp Feature: domain Description: Peptidases_S8_Subtilisin_like_2 Location: 41 640-42435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_45 (pfam14947), RVT-Retrons, PRK06930 (positive control sigma-like factor; Validated), Peptidases_S8_Subtilisin_like_2 (cd04847)

Seq: PGDT01000062.1 Bacillus thuringiensis serovar medellin strain NRRL 23135 50611, whole genome shotgun sequence (95860 bp)
Overview 1 RT 1: 78498-83387 bp Neighborhood of RT #1 [78498, 83392] RVT-GII Intron_maturas2 HNHc zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 78498-79514 bp Feature: gene Location: 79647-79805 bp Feature: gene Location: 80080-81876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80347-81139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80347-81139 bp Feature: domain Description: Intron_maturas2 Location: 81211-81487 bp Feature: domain Description: Intron_maturas2 Location: 812 11-81487 bp Feature: domain Description: HNHc Note: nucleases Location: 81661-81829 bp Feature: domain Description: HNHc Note: nucleases Location: 81661-8182 9 bp Feature: gene Location: 82313-82468 bp Feature: gene Location: 82616-83392 bp Feature: domain Description: zf-IS66 Location: 82973-83105 bp Feature: domain Description: zf-IS66 Location: 82 973-83105 bp Feature: domain Description: DDE_Tnp_IS66 Location: 83153-83387 bp Feature: domain Description: DDE_Tnp_IS66 Location: 83153-83387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)

Seq: PGDT01000065.1 Bacillus thuringiensis serovar medellin strain NRRL 23135 50614, whole genome shotgun sequence (13594 bp)
Overview 1 RT 1: 10676-13569 bp Neighborhood of RT #1 [10676, 13574] RVT-GII GIIM RVT-GII spore_V_T AbrB_C Hfq Feature: gene Location: 10676-10825 bp Feature: gene Location: 10990-11298 bp Feature: gene Location: 11455-12147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11482-11704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11482-11704 bp Feature: domain Description: GIIM Note: maturase Location: 11779-12004 bp Feature: domain Description: GIIM Note: maturase Location: 11779-12004 bp Feature: gene Location: 12171-12854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12489-12840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12489-12840 bp Feature: gene Location: 13014-13319 bp Feature: domain Description: spore_V_T Location: 13104-13188 bp Feature: domain Description: spore_V_T Location: 13 104-13 188 bp Feature: domain Description: AbrB_C Location: 13197-13305 bp Feature: domain Description: AbrB_C Location: 13 197-13 3 05 bp Feature: gene Location: 13341-13574 bp Feature: domain Description: Hfq Location: 13395-13569 bp Feature: domain Description: Hfq Location: 13 3 95-13 569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), spore_V_T (TIGR02851), AbrB_C (pfam18277), Hfq (TIGR02383)

Seq: PGDT01000081.1 Bacillus thuringiensis serovar medellin strain NRRL 23135 50630, whole genome shotgun sequence (30211 bp)
Overview 1 RT 1: 26730-29305 bp Neighborhood of RT #1 [26730, 29319] RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 26730-26948 bp Feature: gene Location: 26999-27127 bp Feature: gene Location: 27219-28517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27498-28137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274 98-28137 bp Feature: domain Description: GIIM Note: maturase Location: 28212-28437 bp Feature: domain Description: GIIM Note: maturase Location: 28212-284 37 bp Feature: gene Location: 28686-28865 bp Feature: gene Location: 29017-29319 bp Feature: domain Description: DDE_Tnp_1 Location: 29128-29305 bp Feature: domain Description: DDE_Tnp_1 Location: 29128-29305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609)

Seq: PGDT01000096.1 Bacillus thuringiensis serovar medellin strain NRRL 23135 50645, whole genome shotgun sequence (2882 bp)
Overview 1 RT 1: 811-2617 bp Neighborhood of RT #1 [811, 2700] RVT-GII GIIM HNHc Feature: gene Location: 811-2700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1108-1846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1108-1846 bp Feature: domain Description: GIIM Note: maturase Location: 1933-2143 bp Feature: domain Description: GIIM Note: maturase Location: 1933-2143 bp Feature: domain Description: HNHc Note: nucleases Location: 2455-2617 bp Feature: domain Description: HNHc Note: nucleases Location: 245 5 -2617 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: PGDT01000384.1 Bacillus thuringiensis serovar medellin strain NRRL 23135 50933, whole genome shotgun sequence (2632 bp)
Overview 1 RT 1: 100-1804 bp Neighborhood of RT #1 [100, 1923] RVT-GII HNHc Feature: gene Location: 100-1923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427-1129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427-1129 bp Feature: domain Description: HNHc Note: nucleases Location: 1654-1804 bp Feature: domain Description: HNHc Note: nucleases Location: 16 54-1804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: PGDT01000497.1 Bacillus thuringiensis serovar medellin strain NRRL 23135 51047, whole genome shotgun sequence (2850 bp)
Overview 1 RT 1: 817-2554 bp Neighborhood of RT #1 [817, 2646] RVT-GII HNHc Feature: gene Location: 817-2646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-17 68 bp Feature: domain Description: HNHc Note: nucleases Location: 2383-2554 bp Feature: domain Description: HNHc Note: nucleases Location: 2383-2554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)