myRT

myRT report for GCA_002915085.1_ASM291508v1

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Seq: PELG01000133.1 Escherichia coli strain DV112i NODE_133_length_2344_cov_2.37472, whole genome shotgun sequence (2344 bp)
Overview 1 RT 1: 3-2277 bp Neighborhood of RT #1 [3, 2342] RVT-GII PHA02517 Feature: gene Location: 3-1274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-1008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-1 008 bp Feature: gene Location: 1866-2342 bp Feature: domain Description: PHA02517 Location: 1923-2277 bp Feature: domain Description: PHA0251 7 Location: 1 923-2277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: PELG01000085.1 Escherichia coli strain DV112i NODE_85_length_5892_cov_3.10066, whole genome shotgun sequence (5892 bp)
Overview 1 RT 1: 922-4971 bp Neighborhood of RT #1 [922, 4971] DUF932 RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 922-1122 bp Feature: gene Location: 1161-1547 bp Feature: domain Description: DUF932 Location: 1167-1512 bp Feature: domain Description: DUF932 Location: 1167-1512 bp Feature: gene Location: 1720-3498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1981-2776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1981-2 776 bp Feature: domain Description: Intron_maturas2 Location: 2902-3127 bp Feature: domain Description: Intron_maturas2 Location: 2 902 -312 7 bp Feature: domain Description: HNHc Note: nucleases Location: 3322-3472 bp Feature: domain Description: HNHc Note: nucleases Location: 332 2 -3472 bp Feature: gene Location: 4093-4341 bp Feature: domain Description: DUF932 Location: 4204-4327 bp Feature: domain Description: DUF932 Location: 42 04-432 7 bp Feature: gene Location: 4561-4971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)