myRT

myRT report for GCA_002915595.1_ASM291559v1

Download annotations/find similar RTs

Seq: PQGG01000012.1 Zhongshania sp. ZX-21, whole genome shotgun sequence (191094 bp)
Overview 1 RT 1: 187737-191082 bp Neighborhood of RT #1 [187737, 191093] YebA RimL RVT-GII GIIM Feature: gene Location: 187737-188588 bp Feature: domain Description: YebA Location: 187740-188529 bp Feature: domain Description: YebA Location: 1 87740-1 88529 bp Feature: gene Location: 188662-189123 bp Feature: domain Description: RimL Location: 188794-189112 bp Feature: domain Description: RimL Location: 1 88794-1 891 1 2 bp Feature: gene Location: 189894-191093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190218-190836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9021 8-1 90836 bp Feature: domain Description: GIIM Note: maturase Location: 190881-191082 bp Feature: domain Description: GIIM Note: maturase Location: 1 90881 -1 91 082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YebA (COG1305), RimL (COG1670), RVT-GII, GIIM (pfam08388)

Seq: PQGG01000015.1 Zhongshania sp. ZX-21, whole genome shotgun sequence (19866 bp)
Overview 1 RT 1: 2-2986 bp Neighborhood of RT #1 [2, 3066] RVT-GII GIIM YesM Feature: gene Location: 2-1201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 326-944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 6-944 bp Feature: domain Description: GIIM Note: maturase Location: 989-1190 bp Feature: domain Description: GIIM Note: maturase Location: 989-1190 bp Feature: gene Location: 1227-1502 bp Feature: gene Location: 1981-3066 bp Feature: domain Description: YesM Location: 2425-2986 bp Feature: domain Description: YesM Location: 2 42 5-2 986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: PQGG01000029.1 Zhongshania sp. ZX-21, whole genome shotgun sequence (93905 bp)
Overview 1 RT 1: 91143-93893 bp Neighborhood of RT #1 [91143, 93904] DUF4287 RVT-GII GIIM Feature: gene Location: 91143-91358 bp Feature: domain Description: DUF4287 Location: 91170-91341 bp Feature: domain Description: DUF4287 Location: 91170-913 41 bp Feature: gene Location: 91514-91828 bp Feature: gene Location: 92705-93904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93029-93647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 029-93 647 bp Feature: domain Description: GIIM Note: maturase Location: 93692-93893 bp Feature: domain Description: GIIM Note: maturase Location: 93 692-93 893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4287 (pfam14117), RVT-GII, GIIM (pfam08388)

Seq: PQGG01000034.1 Zhongshania sp. ZX-21, whole genome shotgun sequence (39517 bp)
Overview 1 RT 1: 35720-39505 bp Neighborhood of RT #1 [35720, 39516] FliJ T3SS_Flik_C RVT-GII GIIM Feature: gene Location: 35720-36181 bp Feature: domain Description: FliJ Location: 35780-36146 bp Feature: domain Description: FliJ Location: 35780-3614 6 bp Feature: gene Location: 36306-37577 bp Feature: domain Description: T3SS_Flik_C Location: 37128-37374 bp Feature: domain Description: T3SS_Flik_C Location: 37128-37374 bp Feature: gene Location: 38317-39516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38641-39259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3864 1-39259 bp Feature: domain Description: GIIM Note: maturase Location: 39304-39505 bp Feature: domain Description: GIIM Note: maturase Location: 39304 -39505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FliJ (pfam02050), T3SS_Flik_C (cd17470), RVT-GII, GIIM (pfam08388)