myRT

myRT report for GCA_002917315.1_ASM291731v1

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Seq: NSKM01000136.1 Escherichia coli strain 202 E16_S7_L001_R1_001_(paired)_contig_136, whole genome shotgun sequence (15333 bp)
Overview 1 RT 1: 3-4401 bp Neighborhood of RT #1 [3, 4415] RVT-GII GIIM GT4_PimA-like IS5 Feature: gene Location: 3-194 bp Feature: gene Location: 234-395 bp Feature: gene Location: 488-1720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 689-1343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 689-1 343 bp Feature: domain Description: GIIM Note: maturase Location: 1421-1643 bp Feature: domain Description: GIIM Note: maturase Location: 1 421 -1 643 bp Feature: gene Location: 2177-2893 bp Feature: domain Description: GT4_PimA-like Location: 2420-2888 bp Feature: domain Description: GT4_PimA-like Location: 2420-2888 bp Feature: gene Location: 3399-4415 bp Feature: domain Description: IS5 Location: 3624-4401 bp Feature: domain Description: IS5 Location: 3624-4401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT4_PimA-like (cd03801), IS5 (COG3039), RVT-GII, GIIM (pfam08388)

Seq: NSKM01000025.1 Escherichia coli strain 202 E16_S7_L001_R1_001_(paired)_contig_25, whole genome shotgun sequence (2141 bp)
Overview 1 RT 1: 93-2140 bp Neighborhood of RT #1 [93, 2140] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1910-2140 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NSKM01000550.1 Escherichia coli strain 202 E16_S7_L001_R1_001_(paired)_contig_550, whole genome shotgun sequence (4635 bp)
Overview 1 RT 1: 1516-4634 bp Neighborhood of RT #1 [1516, 4634] ArdA RVT_N RVT-GII GIIM Feature: gene Location: 1516-2010 bp Feature: domain Description: ArdA Location: 1618-2002 bp Feature: domain Description: ArdA Location: 1618-2002 bp Feature: gene Location: 2071-2289 bp Feature: gene Location: 2503-3933 bp Feature: RT Description: RVT_N Location: 2551-2788 bp Feature: RT Description: RVT_N Location: 2551-2788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2839-3481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283 9-3 481 bp Feature: domain Description: GIIM Note: maturase Location: 3532-3766 bp Feature: domain Description: GIIM Note: maturase Location: 3 53 2-3 766 bp Feature: gene Location: 4052-4348 bp Feature: gene Location: 4506-4634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)