myRT

myRT report for GCA_002917325.1_ASM291732v1

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Seq: NSKN01000550.1 Escherichia coli strain 169 E14_S5_L001_R1_001_(paired)_contig_550, whole genome shotgun sequence (2146 bp)
Overview 1 RT 1: 3-1934 bp Neighborhood of RT #1 [3, 2041] PRK09010 RVT-GII GIIM Feature: gene Location: 3-140 bp Feature: domain Description: PRK09010 Location: 6-138 bp Feature: domain Description: PRK0901 0 Location: 6-1 38 bp Feature: gene Location: 704-2041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007-1640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 007-1 640 bp Feature: domain Description: GIIM Note: maturase Location: 1712-1934 bp Feature: domain Description: GIIM Note: maturase Location: 1 71 2-1 934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09010 (single-stranded DNA-binding protein; Provisional), RVT-GII, GIIM (pfam08388)

Seq: NSKN01000071.1 Escherichia coli strain 169 E14_S5_L001_R1_001_(paired)_contig_71, whole genome shotgun sequence (41531 bp)
Overview 1 RT 1: 1-1854 bp Neighborhood of RT #1 [1, 2738] RVT-Retrons Phage_GPA Feature: gene Location: 1-279 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 118-277 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 118-2 77 bp Feature: gene Location: 460-594 bp Feature: gene Location: 606-2738 bp Feature: domain Description: Phage_GPA Location: 867-1854 bp Feature: domain Description: Phage_GPA Location: 867-1854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Phage_GPA (pfam05840)

Seq: NSKN01000741.1 Escherichia coli strain 169 E14_S5_L001_R1_001_(paired)_contig_741, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NSKN01000921.1 Escherichia coli strain 169 E14_S5_L001_R1_001_(paired)_contig_921, whole genome shotgun sequence (437 bp)
Overview 1 RT 1: 2-413 bp Neighborhood of RT #1 [2, 436] RVT-Retrons Feature: gene Location: 2-436 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8-413 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8-4 13 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons