myRT

myRT report for GCA_002917555.1_ASM291755v1

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Seq: NSME01000034.1 Escherichia coli strain 113 E13_S4_L001_R1_001_(paired)_contig_34, whole genome shotgun sequence (21681 bp)
Overview 1 RT 1: 8934-11848 bp Neighborhood of RT #1 [8934, 11913] RVT-GII GIIM PHA02517 Feature: gene Location: 8934-9077 bp Feature: gene Location: 9102-9305 bp Feature: gene Location: 9373-10896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9646-10378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9646-1 0378 bp Feature: domain Description: GIIM Note: maturase Location: 10453-10651 bp Feature: domain Description: GIIM Note: maturase Location: 1 0453-1 0651 bp Feature: gene Location: 10850-11275 bp Feature: gene Location: 11488-11913 bp Feature: domain Description: PHA02517 Location: 11512-11848 bp Feature: domain Description: PHA0251 7 Location: 1 1 51 2-1 1 848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NSME01000353.1 Escherichia coli strain 113 E13_S4_L001_R1_001_(paired)_contig_353, whole genome shotgun sequence (1542 bp)
Overview 1 RT 1: 287-1513 bp Neighborhood of RT #1 [287, 1539] PRK09413 RVT-GII Feature: gene Location: 287-451 bp Feature: gene Location: 462-659 bp Feature: domain Description: PRK09413 Location: 465-627 bp Feature: domain Description: PRK09413 Location: 465-62 7 bp Feature: gene Location: 1135-1539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1456-1513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1456-1513 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK09413 (IS2 repressor TnpA; Reviewed)

Seq: NSME01000062.1 Escherichia coli strain 113 E13_S4_L001_R1_001_(paired)_contig_62, whole genome shotgun sequence (18253 bp)
Overview 1 RT 1: 1049-4498 bp Neighborhood of RT #1 [1049, 4498] PRK13889 RVT-Retrons HTH_XRE Feature: gene Location: 1049-1180 bp Feature: gene Location: 1239-2741 bp Feature: domain Description: PRK13889 Location: 1242-1821 bp Feature: domain Description: PRK13 889 Location: 1242-1821 bp Feature: gene Location: 2818-3918 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2959-3511 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2959-3 511 bp Feature: gene Location: 3911-4192 bp Feature: domain Description: HTH_XRE Location: 3926-4091 bp Feature: domain Description: HTH_XRE Location: 3 926-4091 bp Feature: gene Location: 4283-4498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons, HTH_XRE (smart00530)