myRT

myRT report for GCA_002917565.1_ASM291756v1

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Seq: NSMG01000139.1 Escherichia coli strain 233 E19_S10_L001_R1_001_(paired)_contig_139, whole genome shotgun sequence (3312 bp)
Overview 1 RT 1: 49-2377 bp Neighborhood of RT #1 [49, 2418] RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 49-246 bp Feature: gene Location: 272-1504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 473-1127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 473-1 1 27 bp Feature: domain Description: GIIM Note: maturase Location: 1205-1427 bp Feature: domain Description: GIIM Note: maturase Location: 1 205-1 427 bp Feature: gene Location: 1499-1918 bp Feature: gene Location: 1966-2418 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1996-2377 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 996-2377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)

Seq: NSMG01000195.1 Escherichia coli strain 233 E19_S10_L001_R1_001_(paired)_contig_195, whole genome shotgun sequence (2403 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NSMG01000024.1 Escherichia coli strain 233 E19_S10_L001_R1_001_(paired)_contig_24, whole genome shotgun sequence (36492 bp)
Overview 1 RT 1: 35329-36490 bp Neighborhood of RT #1 [35329, 36489] RVT-Retrons Feature: gene Location: 35329-35568 bp Feature: gene Location: 35875-36051 bp Feature: gene Location: 36124-36489 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36283-36490 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 6283 -3 6490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: NSMG01000886.1 Escherichia coli strain 233 E19_S10_L001_R1_001_(paired)_contig_886, whole genome shotgun sequence (471 bp)
Overview 1 RT 1: 2-398 bp Neighborhood of RT #1 [2, 439] RVT-Retrons Feature: gene Location: 2-439 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5-398 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5-398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: NSMG01000986.1 Escherichia coli strain 233 E19_S10_L001_R1_001_(paired)_contig_986, whole genome shotgun sequence (221 bp)
Overview 1 RT 1: 2-206 bp Neighborhood of RT #1 [2, 220] RVT-GII Feature: gene Location: 2-220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23-206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23-206 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII