myRT

myRT report for GCA_002917705.1_ASM291770v1

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Seq: NSMM01000119.1 Escherichia coli strain 102 E25_S16_L001_R1_001_(paired)_contig_119, whole genome shotgun sequence (7331 bp)
Overview 1 RT 1: 1-2328 bp Neighborhood of RT #1 [1, 2328] RVT-GII Feature: gene Location: 1-1050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-1006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-1 006 bp Feature: gene Location: 1344-1715 bp Feature: gene Location: 1825-2328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NSMM01000012.1 Escherichia coli strain 102 E25_S16_L001_R1_001_(paired)_contig_12, whole genome shotgun sequence (9026 bp)
Overview 1 RT 1: 3-5615 bp Neighborhood of RT #1 [3, 5734] RVT-Retrons TIR_2 Caudo_TAP phage_tail_N ABC_SMC2_euk 34 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Feature: gene Location: 3-1358 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45-636 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45-636 bp Feature: domain Description: TIR_2 Location: 963-1296 bp Feature: domain Description: TIR_2 Location: 963-12 96 bp Feature: gene Location: 1803-2387 bp Feature: domain Description: Caudo_TAP Location: 2019-2376 bp Feature: domain Description: Caudo_TAP Location: 2 019-2 376 bp Feature: gene Location: 2387-5734 bp Feature: domain Description: phage_tail_N Location: 2390-2789 bp Feature: domain Description: phage_tail_N Location: 2 390-2 789 bp Feature: domain Description: ABC_SMC2_euk Location: 2873-3899 bp Feature: domain Description: ABC_SMC2 _euk Location: 2 873-3899 bp Feature: domain Description: 34 Location: 4487-4820 bp Feature: domain Description: 34 Location: 4487-482 0 bp Feature: domain Description: Collar Location: 5105-5243 bp Feature: domain Description: Collar Location: 5105-52 43 bp Feature: domain Description: Phage_fiber Location: 5294-5333 bp Feature: domain Description: Phage_fiber Location: 52 94-5333 bp Feature: domain Description: Phage_fiber Location: 5390-5429 bp Feature: domain Description: Phage_fiber Location: 5390-542 9 bp Feature: domain Description: Phage_fiber Location: 5537-5576 bp Feature: domain Description: Phage_fiber Location: 5537-5576 bp Feature: domain Description: Phage_fiber Location: 5582-5615 bp Feature: domain Description: Phage_fiber Location: 5582 -5615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Caudo_TAP (pfam02413), phage_tail_N (pfam08400), ABC_SMC2_euk (cd03273), 34 (PHA02584), Collar (pfam07484), Phage_fiber (pfam03335), RVT-Retrons, TIR_2 (pfam13676)

Seq: NSMM01000151.1 Escherichia coli strain 102 E25_S16_L001_R1_001_(paired)_contig_151, whole genome shotgun sequence (841 bp)
Overview 1 RT 1: 396-840 bp Neighborhood of RT #1 [396, 839] RVT-Retrons Feature: gene Location: 396-839 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 687-840 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 687-840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons