myRT

myRT report for GCA_002917815.1_ASM291781v1

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Seq: NXME01000001.1 Shigella flexneri strain 06-2384 unitig_0, whole genome shotgun sequence (4687966 bp)
Overview 1 RT 1: 3113423-3120839 bp Neighborhood of RT #1 [3113423, 3120841] PHA02517 RVT-GII GIIM PHA02517 ESPR Peptidase_S6 autotrans_barl Feature: gene Location: 3113423-3113551 bp Feature: gene Location: 3113641-3113880 bp Feature: domain Description: PHA02517 Location: 3113644-3113815 bp Feature: domain Description: PHA0251 7 Location: 31 1 3644-31 1 381 5 bp Feature: gene Location: 3114472-3115995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3114745-3115477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 1 4745-31 1 5477 bp Feature: domain Description: GIIM Note: maturase Location: 3115552-3115750 bp Feature: domain Description: GIIM Note: maturase Location: 31 1 5552-31 1 5750 bp Feature: gene Location: 3116172-3116558 bp Feature: domain Description: PHA02517 Location: 3116175-3116556 bp Feature: domain Description: PHA0251 7 Location: 31 1 61 75-31 1 6556 bp Feature: gene Location: 3116723-3120841 bp Feature: domain Description: ESPR Location: 3116726-3116795 bp Feature: domain Description: ESPR Location: 31 1 6726-31 1 6795 bp Feature: domain Description: Peptidase_S6 Location: 3116876-3119048 bp Feature: domain Description: Peptidase_S6 Location: 31 1 6876-31 1 9048 bp Feature: domain Description: autotrans_barl Location: 3119612-3120839 bp Feature: domain Description: autotrans_barl Location: 31 1 961 2-31 20839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), ESPR (pfam13018), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414)

Seq: NXME01000003.1 Shigella flexneri strain 06-2384 unitig_1, whole genome shotgun sequence (214255 bp)
Overview 1 RT 1: 49660-52795 bp 2 RT 2: 150670-153996 bp Neighborhood of RT #1 [49660, 52795] PAP2_acid_phosphatase Tra5 RVT-GII GIIM Neighborhood of RT #2 [150670, 154010] PHA02517 DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 49660-50409 bp Feature: domain Description: PAP2_acid_phosphatase Location: 49735-50389 bp Feature: domain Description: PAP2 _acid_phosphatase Location: 49735-50389 bp Feature: gene Location: 50805-51005 bp Feature: domain Description: Tra5 Location: 50814-50988 bp Feature: domain Description: Tra5 Location: 50814-50988 bp Feature: gene Location: 51018-51821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51318-51813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51318-51813 bp Feature: gene Location: 51874-52200 bp Feature: domain Description: GIIM Note: maturase Location: 51907-52126 bp Feature: domain Description: GIIM Note: maturase Location: 51907-52 12 6 bp Feature: gene Location: 52553-52795 bp Feature: gene Location: 150670-151317 bp Feature: domain Description: PHA02517 Location: 150673-151315 bp Feature: domain Description: PHA02 517 Location: 150673-151315 bp Feature: gene Location: 151411-151542 bp Feature: domain Description: DDE_Tnp_IS66 Location: 151423-151516 bp Feature: domain Description: DDE_Tnp_IS66 Location: 15142 3-151516 bp Feature: gene Location: 152019-153236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152205-152859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152 2 05-152 859 bp Feature: domain Description: GIIM Note: maturase Location: 152937-153159 bp Feature: domain Description: GIIM Note: maturase Location: 152 937-153159 bp Feature: gene Location: 153352-153498 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 153364-153475 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 153364-153475 bp Feature: gene Location: 153525-154010 bp Feature: domain Description: COG3547 Location: 153543-153996 bp Feature: domain Description: COG3547 Location: 153543-153996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAP2_acid_phosphatase (cd03397), Tra5 (COG2801), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )