myRT

myRT report for GCA_002918175.1_ASM291817v1

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Seq: MLBA01000011.1 Escherichia coli strain NAEC2 contig011, whole genome shotgun sequence (128753 bp)
Overview 1 RT 1: 22935-29178 bp Neighborhood of RT #1 [22935, 29315] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22935-23201 bp Feature: domain Description: Phage_integrase Location: 23001-23097 bp Feature: domain Description: Phage_integrase Location: 23001 -23097 bp Feature: gene Location: 23284-23754 bp Feature: gene Location: 24101-27310 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24629-25118 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24629-251 1 8 bp Feature: domain Description: nitrilase Location: 26609-27221 bp Feature: domain Description: nitrilase Location: 26609-27221 bp Feature: gene Location: 27605-28408 bp Feature: domain Description: AbiEi_3_N Location: 27638-27899 bp Feature: domain Description: AbiEi_3_N Location: 27638-27899 bp Feature: domain Description: AbiEi_3 Location: 27911-28367 bp Feature: domain Description: AbiEi_3 Location: 2791 1 -28367 bp Feature: gene Location: 28395-29315 bp Feature: domain Description: AbiEii Location: 28437-29178 bp Feature: domain Description: AbiEii Location: 28437-291 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: MLBA01000080.1 Escherichia coli strain NAEC2 contig080, whole genome shotgun sequence (15075 bp)
Overview 1 RT 1: 174-3589 bp Neighborhood of RT #1 [174, 3594] Tra5 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 174-605 bp Feature: domain Description: Tra5 Location: 180-597 bp Feature: domain Description: Tra5 Location: 180-597 bp Feature: gene Location: 716-946 bp Feature: gene Location: 998-2239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1271-2003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 71-2 003 bp Feature: domain Description: GIIM Note: maturase Location: 2078-2234 bp Feature: domain Description: GIIM Note: maturase Location: 2 078-2 2 34 bp Feature: gene Location: 2831-3298 bp Feature: domain Description: PHA02517 Location: 2897-3236 bp Feature: domain Description: PHA02 517 Location: 2 897-32 36 bp Feature: gene Location: 3295-3594 bp Feature: domain Description: InsE Location: 3325-3589 bp Feature: domain Description: InsE Location: 332 5-3589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)