myRT

myRT report for GCA_002918665.1_ASM291866v1

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Seq: PQKO01000001.1 Klebsiella michiganensis strain KONIH10 NODE_1, whole genome shotgun sequence (544089 bp)
Overview 1 RT 1: 192-2967 bp Neighborhood of RT #1 [192, 2967] PHA02517 RVT-Retrons Feature: gene Location: 192-404 bp Feature: domain Description: PHA02517 Location: 195-396 bp Feature: domain Description: PHA0251 7 Location: 1 95-396 bp Feature: gene Location: 884-1087 bp Feature: gene Location: 1247-2065 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1283-1808 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 283-1 808 bp Feature: gene Location: 2282-2428 bp Feature: gene Location: 2488-2967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-Retrons

Seq: PQKO01000015.1 Klebsiella michiganensis strain KONIH10 NODE_15, whole genome shotgun sequence (148057 bp)
Overview 1 RT 1: 23375-27396 bp Neighborhood of RT #1 [23375, 27434] RVT-UG11 PRK04972 YbjM Feature: gene Location: 23375-23578 bp Feature: gene Location: 23917-24096 bp Feature: gene Location: 24059-24832 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 24194-24647 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 4194-2 4647 bp Feature: gene Location: 25098-26783 bp Feature: domain Description: PRK04972 Location: 25101-26772 bp Feature: domain Description: PRK04972 Location: 2 5101-2 6772 bp Feature: gene Location: 27051-27434 bp Feature: domain Description: YbjM Location: 27063-27396 bp Feature: domain Description: YbjM Location: 2 7063-2 7396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, PRK04972 (putative transporter; Provisional), YbjM (pfam11045)

Seq: PQKO01000035.1 Klebsiella michiganensis strain KONIH10 NODE_35, whole genome shotgun sequence (52611 bp)
Overview 1 RT 1: 12793-20130 bp Neighborhood of RT #1 [12793, 20141] proB proA RVT-UG15 AcrR TrxB Feature: gene Location: 12793-13896 bp Feature: domain Description: proB Location: 12808-13891 bp Feature: domain Description: proB Location: 12808-13 891 bp Feature: gene Location: 13907-15160 bp Feature: domain Description: proA Location: 13934-15125 bp Feature: domain Description: proA Location: 13 93 4-15125 bp Feature: gene Location: 16233-17525 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 16320-16740 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 163 20-16740 bp Feature: gene Location: 18469-19128 bp Feature: domain Description: AcrR Location: 18505-19093 bp Feature: domain Description: AcrR Location: 18505-19093 bp Feature: gene Location: 19248-20141 bp Feature: domain Description: TrxB Location: 19254-20130 bp Feature: domain Description: TrxB Location: 19254-2013 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proB (TIGR01027), proA (TIGR00407), RVT-UG15, AcrR (COG1309), TrxB (COG0492)

Seq: PQKO01000071.1 Klebsiella michiganensis strain KONIH10 NODE_71, whole genome shotgun sequence (3829 bp)
Overview 1 RT 1: 19-3828 bp Neighborhood of RT #1 [19, 3828] COG3547 PHA02517 RVT-GII GIIM Feature: gene Location: 19-1095 bp Feature: domain Description: COG3547 Location: 58-979 bp Feature: domain Description: COG354 7 Location: 58-979 bp Feature: gene Location: 1314-1514 bp Feature: domain Description: PHA02517 Location: 1317-1479 bp Feature: domain Description: PHA02517 Location: 1317-14 79 bp Feature: gene Location: 1637-3160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1910-2642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1910-264 2 bp Feature: domain Description: GIIM Note: maturase Location: 2717-2915 bp Feature: domain Description: GIIM Note: maturase Location: 2717-2915 bp Feature: gene Location: 3454-3828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: PQKO01000082.1 Klebsiella michiganensis strain KONIH10 NODE_82, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 60-1831 bp Neighborhood of RT #1 [60, 1831] RVT-GII Feature: gene Location: 60-1544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-115 2 bp Feature: gene Location: 1598-1831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII