myRT

myRT report for GCA_002918835.1_ASM291883v1

Download annotations/find similar RTs

Seq: PQLG01000033.1 Citrobacter freundii complex sp. CFNIH6 NODE_33, whole genome shotgun sequence (60241 bp)
Overview 1 RT 1: 45728-51108 bp Neighborhood of RT #1 [45728, 51113] Caudo_TAP Caudo_TAP PRK09692 RVT-UG7 Psu Feature: gene Location: 45728-46330 bp Feature: domain Description: Caudo_TAP Location: 45791-45917 bp Feature: domain Description: Caudo_TAP Location: 45791 -4591 7 bp Feature: domain Description: Caudo_TAP Location: 45956-46325 bp Feature: domain Description: Caudo_TAP Location: 45956-46325 bp Feature: gene Location: 46693-47877 bp Feature: domain Description: PRK09692 Location: 46699-47854 bp Feature: domain Description: PRK09692 Location: 46699-47854 bp Feature: gene Location: 47870-49498 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 48278-48707 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 48278-48707 bp Feature: gene Location: 49495-50235 bp Feature: gene Location: 50547-51113 bp Feature: domain Description: Psu Location: 50565-51108 bp Feature: domain Description: Psu Location: 50565-51 1 08 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Caudo_TAP (pfam02413), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)

Seq: PQLG01000067.1 Citrobacter freundii complex sp. CFNIH6 NODE_67, whole genome shotgun sequence (6905 bp)
Overview 1 RT 1: 3-5406 bp Neighborhood of RT #1 [3, 5489] PRK15442 PRK13746 RVT-GII GIIM efflux_Bcr_CflA Feature: gene Location: 3-1082 bp Feature: domain Description: PRK15442 Location: 246-1056 bp Feature: domain Description: PRK15442 Location: 2 46-1056 bp Feature: gene Location: 1182-1991 bp Feature: domain Description: PRK13746 Location: 1203-1983 bp Feature: domain Description: PRK13746 Location: 12 03-1983 bp Feature: gene Location: 2080-3429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2362-2980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 362 -2 980 bp Feature: domain Description: GIIM Note: maturase Location: 3028-3232 bp Feature: domain Description: GIIM Note: maturase Location: 302 8-32 32 bp Feature: gene Location: 3638-3799 bp Feature: gene Location: 4182-5489 bp Feature: domain Description: efflux_Bcr_CflA Location: 4263-5406 bp Feature: domain Description: efflux_Bcr_CflA Location: 42 63-5406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15442 (beta-lactamase TEM; Provisional), PRK13746 (aminoglycoside resistance protein; Provisional), RVT-GII, GIIM (pfam08388), efflux_Bcr_CflA (TIGR00710)