myRT

myRT report for GCA_002918935.1_ASM291893v1

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Seq: PQLX01000013.1 Citrobacter amalonaticus strain S1285 scaffold13.1, whole genome shotgun sequence (135393 bp)
Overview 1 RT 1: 129141-135389 bp Neighborhood of RT #1 [129141, 135391] PRK10547 PRK10612 RVT-GII GIIM RAYT PRK06819 Feature: gene Location: 129141-131174 bp Feature: domain Description: PRK10547 Location: 129144-131148 bp Feature: domain Description: PRK1 0547 Location: 1 291 44-1 31 1 48 bp Feature: gene Location: 131179-131685 bp Feature: domain Description: PRK10612 Location: 131212-131674 bp Feature: domain Description: PRK1 061 2 Location: 1 31 21 2-1 31 674 bp Feature: gene Location: 132140-133507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132473-133085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 32473-1 33085 bp Feature: domain Description: GIIM Note: maturase Location: 133142-133349 bp Feature: domain Description: GIIM Note: maturase Location: 1 331 42-1 33349 bp Feature: gene Location: 133760-134080 bp Feature: domain Description: RAYT Location: 133805-134021 bp Feature: domain Description: RAYT Location: 1 33805-1 34021 bp Feature: gene Location: 134405-135391 bp Feature: domain Description: PRK06819 Location: 134408-135389 bp Feature: domain Description: PRK0681 9 Location: 1 34408-1 35389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10547 (chemotaxis protein CheA; Provisional), PRK10612 (chemotaxis protein CheW), RVT-GII, GIIM (pfam08388), RAYT (COG1943), PRK06819 (FliC/FljB family flagellin)

Seq: PQLX01000006.1 Citrobacter amalonaticus strain S1285 scaffold6.1, whole genome shotgun sequence (398914 bp)
Overview 1 RT 1: 370296-376019 bp Neighborhood of RT #1 [370296, 376019] DUF5375 Prim_Zn_Ribbon COG3378 RVT-Retrons TIR_2 Arm-DNA-bind_3 Feature: gene Location: 370296-370616 bp Feature: domain Description: DUF5375 Location: 370299-370614 bp Feature: domain Description: DUF5375 Location: 3702 99-370614 bp Feature: gene Location: 370631-372964 bp Feature: domain Description: Prim_Zn_Ribbon Location: 370724-370829 bp Feature: domain Description: Prim_Zn_Ribbon Location: 37072 4-37082 9 bp Feature: domain Description: COG3378 Location: 371438-372956 bp Feature: domain Description: COG3378 Location: 371438-372 956 bp Feature: gene Location: 373553-375184 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 373868-374465 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 373868-374465 bp Feature: domain Description: TIR_2 Location: 374789-375149 bp Feature: domain Description: TIR_2 Location: 374789-375149 bp Feature: gene Location: 375591-375788 bp Feature: domain Description: Arm-DNA-bind_3 Location: 375651-375726 bp Feature: domain Description: Arm-DNA-bind_3 Location: 375651-37572 6 bp Feature: gene Location: 375810-376019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5375 (pfam17345), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), RVT-Retrons, TIR_2 (pfam13676), Arm-DNA-bind_3 (pfam13356)