myRT

myRT report for GCA_002919495.1_ASM291949v1

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Seq: PQLZ01000011.1 Citrobacter amalonaticus strain S648 scaffold11.1, whole genome shotgun sequence (101121 bp)
Overview 1 RT 1: 94890-101117 bp Neighborhood of RT #1 [94890, 101119] PRK10547 PRK10612 RVT-GII GIIM RAYT PRK06819 Feature: gene Location: 94890-96923 bp Feature: domain Description: PRK10547 Location: 94893-96897 bp Feature: domain Description: PRK1 0547 Location: 94893-96897 bp Feature: gene Location: 96928-97434 bp Feature: domain Description: PRK10612 Location: 96961-97423 bp Feature: domain Description: PRK1 061 2 Location: 96961 -97423 bp Feature: gene Location: 97889-99256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98222-98834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98222-98834 bp Feature: domain Description: GIIM Note: maturase Location: 98891-99098 bp Feature: domain Description: GIIM Note: maturase Location: 98891 -99098 bp Feature: gene Location: 99509-99829 bp Feature: domain Description: RAYT Location: 99554-99770 bp Feature: domain Description: RAYT Location: 99554-99770 bp Feature: gene Location: 100154-101119 bp Feature: domain Description: PRK06819 Location: 100157-101117 bp Feature: domain Description: PRK0681 9 Location: 1 001 57-1 01 1 1 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06819 (FliC/FljB family flagellin), PRK10547 (chemotaxis protein CheA; Provisional), PRK10612 (chemotaxis protein CheW), RVT-GII, GIIM (pfam08388), RAYT (COG1943)

Seq: PQLZ01000005.1 Citrobacter amalonaticus strain S648 scaffold5.1, whole genome shotgun sequence (437959 bp)
Overview 1 RT 1: 408345-414068 bp Neighborhood of RT #1 [408345, 414068] DUF5375 Prim_Zn_Ribbon COG3378 RVT-Retrons TIR_2 Arm-DNA-bind_3 Feature: gene Location: 408345-408665 bp Feature: domain Description: DUF5375 Location: 408348-408663 bp Feature: domain Description: DUF5375 Location: 408348-408663 bp Feature: gene Location: 408680-411013 bp Feature: domain Description: Prim_Zn_Ribbon Location: 408773-408878 bp Feature: domain Description: Prim_Zn_Ribbon Location: 408773-408878 bp Feature: domain Description: COG3378 Location: 409487-411005 bp Feature: domain Description: COG3378 Location: 409487-411005 bp Feature: gene Location: 411602-413233 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 411917-412514 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 411917-412 514 bp Feature: domain Description: TIR_2 Location: 412838-413198 bp Feature: domain Description: TIR_2 Location: 412 838-413198 bp Feature: gene Location: 413640-413837 bp Feature: domain Description: Arm-DNA-bind_3 Location: 413700-413775 bp Feature: domain Description: Arm-DNA-bind_3 Location: 413700-413775 bp Feature: gene Location: 413859-414068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5375 (pfam17345), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), RVT-Retrons, TIR_2 (pfam13676), Arm-DNA-bind_3 (pfam13356)