myRT

myRT report for GCA_002920735.1_ASM292073v1

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Seq: PQOP01000121.1 Mycobacterium kansasii strain BR6849 NODE_121_length_18476_cov_14.857011, whole genome shotgun sequence (18476 bp)
Overview 1 RT 1: 10257-17992 bp Neighborhood of RT #1 [10257, 17992] PRK03381 SSL2 RVT-GII GIIM Germane Gmad2 Feature: gene Location: 10257-12704 bp Feature: domain Description: PRK03381 Location: 10287-12648 bp Feature: domain Description: PRK03381 Location: 1 0287-1 2648 bp Feature: gene Location: 12718-14439 bp Feature: domain Description: SSL2 Location: 12757-14137 bp Feature: domain Description: SSL2 Location: 1 2757-1 41 37 bp Feature: gene Location: 15294-16667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15645-16269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5645-1 6269 bp Feature: domain Description: GIIM Note: maturase Location: 16362-16575 bp Feature: domain Description: GIIM Note: maturase Location: 1 6362-1 6575 bp Feature: gene Location: 16999-17727 bp Feature: domain Description: Germane Location: 17044-17386 bp Feature: domain Description: Germane Location: 1 7044-1 7386 bp Feature: domain Description: Gmad2 Location: 17437-17692 bp Feature: domain Description: Gmad2 Location: 1 7437-1 7692 bp Feature: gene Location: 17831-17992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03381 (PII uridylyl-transferase; Provisional), SSL2 (COG1061), RVT-GII, GIIM (pfam08388), Germane (smart00909), Gmad2 (pfam10648)

Seq: PQOP01000054.1 Mycobacterium kansasii strain BR6849 NODE_54_length_41709_cov_18.406252, whole genome shotgun sequence (41709 bp)
Overview 1 RT 1: 29233-33217 bp Neighborhood of RT #1 [29233, 33399] Tra5 RVT-GII GIIM HTH_32 Feature: gene Location: 29233-29961 bp Feature: gene Location: 30215-30973 bp Feature: domain Description: Tra5 Location: 30368-30824 bp Feature: domain Description: Tra5 Location: 30368-3082 4 bp Feature: gene Location: 30931-32322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31192-31879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31192 -31879 bp Feature: domain Description: GIIM Note: maturase Location: 31954-32149 bp Feature: domain Description: GIIM Note: maturase Location: 31954-32 149 bp Feature: gene Location: 32604-32795 bp Feature: gene Location: 32911-33399 bp Feature: domain Description: HTH_32 Location: 33004-33217 bp Feature: domain Description: HTH_32 Location: 33004-332 17 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), HTH_32 (pfam13565)