myRT

myRT report for GCA_002921215.1_ASM292121v1

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Seq: PDVK01000105.1 Bacillus thuringiensis strain BR145 NODE_105_length_14074_cov_137.968, whole genome shotgun sequence (14074 bp)
Overview 1 RT 1: 4874-14061 bp Neighborhood of RT #1 [4874, 14061] RapH_N TPR TPR PRK13922 AE_Prim_S_like RVT-UG10 Feature: gene Location: 4874-5965 bp Feature: domain Description: RapH_N Location: 4895-5066 bp Feature: domain Description: RapH_N Location: 4895-5066 bp Feature: domain Description: TPR Location: 5201-5468 bp Feature: domain Description: TPR Location: 5201 -5468 bp Feature: domain Description: TPR Location: 5513-5924 bp Feature: domain Description: TPR Location: 551 3-5924 bp Feature: gene Location: 6428-6655 bp Feature: domain Description: PRK13922 Location: 6515-6635 bp Feature: domain Description: PRK1 3922 Location: 651 5-6635 bp Feature: gene Location: 6931-12570 bp Feature: domain Description: AE_Prim_S_like Location: 7141-7360 bp Feature: domain Description: AE_Prim_S_like Location: 71 41 -7360 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 8347-9001 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 8347-9001 bp Feature: gene Location: 13009-13434 bp Feature: gene Location: 13444-14061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RapH_N (pfam18801), TPR (smart00028), PRK13922 (rod shape-determining protein MreC; Provisional), AE_Prim_S_like (cl01287), RVT-UG10

Seq: PDVK01000149.1 Bacillus thuringiensis strain BR145 NODE_149_length_5299_cov_1086.91, whole genome shotgun sequence (5299 bp)
Overview 1 RT 1: 613-5068 bp Neighborhood of RT #1 [613, 5193] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc Feature: gene Location: 613-2436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1711 bp Feature: domain Description: Intron_maturas2 Location: 1783-2101 bp Feature: domain Description: Intron_maturas2 Location: 1783-2 101 bp Feature: domain Description: HNHc Note: nucleases Location: 2254-2407 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 54-2 407 bp Feature: gene Location: 2575-2721 bp Feature: gene Location: 3403-5193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3700-4396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3700-4396 bp Feature: domain Description: HNHc Note: nucleases Location: 4936-5068 bp Feature: domain Description: HNHc Note: nucleases Location: 4936-5068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: PDVK01000180.1 Bacillus thuringiensis strain BR145 NODE_180_length_2705_cov_929.555, whole genome shotgun sequence (2705 bp)
Overview 1 RT 1: 159-2311 bp Neighborhood of RT #1 [159, 2311] RVT-GII HNHc Feature: gene Location: 159-1955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453 -1149 bp Feature: domain Description: HNHc Note: nucleases Location: 1749-1824 bp Feature: domain Description: HNHc Note: nucleases Location: 1749-1824 bp Feature: gene Location: 2129-2311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: PDVK01000182.1 Bacillus thuringiensis strain BR145 NODE_182_length_2680_cov_1533.06, whole genome shotgun sequence (2680 bp)
Overview 1 RT 1: 261-2450 bp Neighborhood of RT #1 [261, 2587] RVT-GII HNHc Feature: gene Location: 261-479 bp Feature: gene Location: 791-2587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1049-1754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104 9-1754 bp Feature: domain Description: HNHc Note: nucleases Location: 2315-2450 bp Feature: domain Description: HNHc Note: nucleases Location: 2315-24 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: PDVK01000184.1 Bacillus thuringiensis strain BR145 NODE_184_length_2608_cov_1643.55, whole genome shotgun sequence (2608 bp)
Overview 1 RT 1: 740-2393 bp Neighborhood of RT #1 [740, 2509] RVT-GII HNHc Feature: gene Location: 740-2509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1694 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-2393 bp Feature: domain Description: HNHc Note: nucleases Location: 225 5 -2393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: PDVK01000189.1 Bacillus thuringiensis strain BR145 NODE_189_length_2329_cov_1247.56, whole genome shotgun sequence (2329 bp)
Overview 1 RT 1: 390-2190 bp Neighborhood of RT #1 [390, 2213] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 390-2213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 654-1488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 54-1488 bp Feature: domain Description: Intron_maturas2 Location: 1557-1896 bp Feature: domain Description: Intron_maturas2 Location: 1557-1896 bp Feature: domain Description: HNHc Note: nucleases Location: 2034-2190 bp Feature: domain Description: HNHc Note: nucleases Location: 2034-2190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: PDVK01000223.1 Bacillus thuringiensis strain BR145 NODE_223_length_1224_cov_1036.48, whole genome shotgun sequence (1224 bp)
Overview 1 RT 1: 2-1196 bp Neighborhood of RT #1 [2, 1222] RVT-GII GIIM Feature: gene Location: 2-1222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 212-917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 212-917 bp Feature: domain Description: GIIM Note: maturase Location: 1031-1196 bp Feature: domain Description: GIIM Note: maturase Location: 1031-1196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PDVK01000030.1 Bacillus thuringiensis strain BR145 NODE_30_length_66770_cov_540.654, whole genome shotgun sequence (66770 bp)
Overview 1 RT 1: 34888-42117 bp Neighborhood of RT #1 [34888, 42117] RVT-GII GIIM KOG1000 KOG1000 Feature: gene Location: 34888-35115 bp Feature: gene Location: 35187-36095 bp Feature: gene Location: 36842-38707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37142-37847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37142-378 47 bp Feature: domain Description: GIIM Note: maturase Location: 37934-38117 bp Feature: domain Description: GIIM Note: maturase Location: 37934-38 117 bp Feature: gene Location: 38985-41387 bp Feature: domain Description: KOG1000 Location: 39693-39909 bp Feature: domain Description: KOG1000 Location: 39693-39909 bp Feature: domain Description: KOG1000 Location: 40512-40845 bp Feature: domain Description: KOG1000 Location: 40512-408 45 bp Feature: gene Location: 41404-42117 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: PDVK01000073.1 Bacillus thuringiensis strain BR145 NODE_73_length_22245_cov_312.509, whole genome shotgun sequence (22245 bp)
Overview 1 RT 1: 3-4783 bp Neighborhood of RT #1 [3, 4962] RVT-GII GIIM Ftsk_gamma Ftsk_gamma rpsA Feature: gene Location: 3-1787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 213-918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 213-9 18 bp Feature: domain Description: GIIM Note: maturase Location: 1032-1200 bp Feature: domain Description: GIIM Note: maturase Location: 1032-1200 bp Feature: gene Location: 2161-3720 bp Feature: domain Description: Ftsk_gamma Location: 2710-2890 bp Feature: domain Description: Ftsk_gamma Location: 2710-289 0 bp Feature: domain Description: Ftsk_gamma Location: 3043-3217 bp Feature: domain Description: Ftsk_gamma Location: 3043-3217 bp Feature: gene Location: 3979-4962 bp Feature: domain Description: rpsA Location: 4246-4783 bp Feature: domain Description: rpsA Location: 4246-4783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Ftsk_gamma (smart00843), rpsA (TIGR00717)