myRT

myRT report for GCA_002923755.1_ASM292375v1

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Seq: PGFZ01000001.1 Methylovulum psychrotolerans strain Sph1 AADEFJLK_1, whole genome shotgun sequence (1224997 bp)
Overview 1 RT 1: 927840-935264 bp Neighborhood of RT #1 [927840, 935272] FtsK FtsK RadC RVT-GII MauG Ppnp Feature: gene Location: 927840-930170 bp Feature: domain Description: FtsK Location: 927963-928386 bp Feature: domain Description: FtsK Location: 927963-928386 bp Feature: domain Description: FtsK Location: 928545-930159 bp Feature: domain Description: FtsK Location: 928545-9301 59 bp Feature: gene Location: 930390-931064 bp Feature: domain Description: RadC Location: 930393-931062 bp Feature: domain Description: RadC Location: 930393-931 062 bp Feature: gene Location: 931625-932965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931886-932576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931 886-932576 bp Feature: gene Location: 933517-934770 bp Feature: domain Description: MauG Location: 933577-934708 bp Feature: domain Description: MauG Location: 933577-934708 bp Feature: gene Location: 934958-935272 bp Feature: domain Description: Ppnp Location: 934991-935264 bp Feature: domain Description: Ppnp Location: 934991 -935264 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK (COG1674), RadC (pfam04002), RVT-GII, MauG (COG1858), Ppnp

Seq: PGFZ01000010.1 Methylovulum psychrotolerans strain Sph1 AADEFJLK_10, whole genome shotgun sequence (135829 bp)
Overview 1 RT 1: 32825-36899 bp Neighborhood of RT #1 [32825, 36899] RVT-Retrons PilZ PilZ Feature: gene Location: 32825-33337 bp Feature: gene Location: 33423-34070 bp Feature: gene Location: 34181-35179 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34460-34985 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34460-34985 bp Feature: gene Location: 35641-36384 bp Feature: domain Description: PilZ Location: 35698-35950 bp Feature: domain Description: PilZ Location: 35698-35950 bp Feature: domain Description: PilZ Location: 35977-36232 bp Feature: domain Description: PilZ Location: 35977-362 32 bp Feature: gene Location: 36759-36899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PilZ (pfam07238)

Seq: PGFZ01000009.1 Methylovulum psychrotolerans strain Sph1 AADEFJLK_9, whole genome shotgun sequence (197422 bp)
Overview 1 RT 1: 41889-45972 bp Neighborhood of RT #1 [41889, 45974] Csx3_III-U RVT-CRISPR RVT-CRISPR Cas_Cas1 Zn_Tnp_IS1595 DDE_Tnp_IS1595 cas1_CYANO Feature: gene Location: 41889-42137 bp Feature: domain Description: Csx3_III-U Location: 41997-42132 bp Feature: domain Description: Csx3 _III-U Location: 41997-4213 2 bp Feature: gene Location: 42342-42488 bp Feature: gene Location: 42875-43525 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 43088-43451 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 43 088-43 451 bp Feature: gene Location: 43596-44786 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 43602-43692 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 43 602-43 692 bp Feature: domain Description: Cas_Cas1 Location: 43944-44781 bp Feature: domain Description: Cas_Cas1 Location: 43 944-44781 bp Feature: gene Location: 44868-45806 bp Feature: domain Description: Zn_Tnp_IS1595 Location: 44937-45060 bp Feature: domain Description: Zn_Tnp_IS1595 Location: 4493 7-45060 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 45267-45702 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 45267-45702 bp Feature: gene Location: 45828-45974 bp Feature: domain Description: cas1_CYANO Location: 45834-45972 bp Feature: domain Description: cas1_CYANO Location: 4583 4-45972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Csx3_III-U (cl09837), RVT-CRISPR, Cas_Cas1 (pfam01867), Zn_Tnp_IS1595 (pfam12760), DDE_Tnp_IS1595 (pfam12762), cas1_CYANO (TIGR04093)