myRT

myRT report for GCA_002924285.1_ASM292428v1

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Seq: PGUB01000162.1 Aquimarina sp. I32.4 Contig_0000162, whole genome shotgun sequence (6355 bp)
Overview 1 RT 1: 2688-6007 bp Neighborhood of RT #1 [2688, 6354] dnaG dnaG RVT-UG2 Feature: gene Location: 2688-3662 bp Feature: domain Description: dnaG Location: 2781-3042 bp Feature: domain Description: dnaG Location: 2781 -3042 bp Feature: domain Description: dnaG Location: 3276-3594 bp Feature: domain Description: dnaG Location: 3276-3594 bp Feature: gene Location: 3724-4398 bp Feature: gene Location: 4861-6354 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 5107-6007 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 51 07-6007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaG (TIGR01391), RVT-UG2

Seq: PGUB01000182.1 Aquimarina sp. I32.4 Contig_0000182, whole genome shotgun sequence (4899 bp)
Overview 1 RT 1: 1997-4712 bp Neighborhood of RT #1 [1997, 4897] SH3_3 COG4922 RVT-GII GIIM Feature: gene Location: 1997-2719 bp Feature: domain Description: SH3_3 Location: 2084-2279 bp Feature: domain Description: SH3_3 Location: 2 084-2 2 79 bp Feature: gene Location: 2841-3218 bp Feature: domain Description: COG4922 Location: 2853-3216 bp Feature: domain Description: COG492 2 Location: 2 853-32 16 bp Feature: gene Location: 3800-4897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3812-4427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3812 -442 7 bp Feature: domain Description: GIIM Note: maturase Location: 4499-4712 bp Feature: domain Description: GIIM Note: maturase Location: 4499-4712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SH3_3 (pfam08239), COG4922 (Predicted SnoaL-like aldol condensation-catalyzing enzyme ), RVT-GII, GIIM (pfam08388)

Seq: PGUB01000195.1 Aquimarina sp. I32.4 Contig_0000195, whole genome shotgun sequence (3686 bp)
Overview 1 RT 1: 191-3499 bp Neighborhood of RT #1 [191, 3684] PHA02517 M20_dipept_like RVT-GII GIIM Feature: gene Location: 191-853 bp Feature: domain Description: PHA02517 Location: 206-836 bp Feature: domain Description: PHA02517 Location: 206-83 6 bp Feature: gene Location: 938-2458 bp Feature: domain Description: M20_dipept_like Location: 1058-2447 bp Feature: domain Description: M20_dipept_like Location: 1058-2447 bp Feature: gene Location: 2587-3684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2599-3214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2599-3 214 bp Feature: domain Description: GIIM Note: maturase Location: 3286-3499 bp Feature: domain Description: GIIM Note: maturase Location: 3 286-3 499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), M20_dipept_like (cd05680), RVT-GII, GIIM (pfam08388)

Seq: PGUB01000204.1 Aquimarina sp. I32.4 Contig_0000204, whole genome shotgun sequence (2927 bp)
Overview 1 RT 1: 180-2740 bp Neighborhood of RT #1 [180, 2925] COG2865 RVT-GII GIIM Feature: gene Location: 180-1655 bp Feature: domain Description: COG2865 Location: 237-1641 bp Feature: domain Description: COG2865 Location: 237-164 1 bp Feature: gene Location: 1828-2925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1840-2455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184 0-24 55 bp Feature: domain Description: GIIM Note: maturase Location: 2527-2740 bp Feature: domain Description: GIIM Note: maturase Location: 2527-274 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-GII, GIIM (pfam08388)

Seq: PGUB01000208.1 Aquimarina sp. I32.4 Contig_0000208, whole genome shotgun sequence (2637 bp)
Overview 1 RT 1: 2-2635 bp Neighborhood of RT #1 [2, 2635] RVT-GII GIIM Feature: gene Location: 2-1231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194-836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194-836 bp Feature: domain Description: GIIM Note: maturase Location: 923-1139 bp Feature: domain Description: GIIM Note: maturase Location: 923-1139 bp Feature: gene Location: 1430-2635 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PGUB01000213.1 Aquimarina sp. I32.4 Contig_0000213, whole genome shotgun sequence (2504 bp)
Overview 1 RT 1: 3-2035 bp Neighborhood of RT #1 [3, 2268] RVT-GII GIIM Abi_2 Feature: gene Location: 3-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15-630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15-6 30 bp Feature: domain Description: GIIM Note: maturase Location: 702-915 bp Feature: domain Description: GIIM Note: maturase Location: 702-915 bp Feature: gene Location: 1393-2268 bp Feature: domain Description: Abi_2 Location: 1486-2035 bp Feature: domain Description: Abi_2 Location: 1486 -2035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Abi_2 (pfam07751)

Seq: PGUB01000244.1 Aquimarina sp. I32.4 Contig_0000244, whole genome shotgun sequence (1026 bp)
Overview 1 RT 1: 2-926 bp Neighborhood of RT #1 [2, 1024] RVT-GII Feature: gene Location: 2-1024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266-926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 266-926 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII