myRT

myRT report for GCA_002925715.1_ASM292571v1

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Seq: PITM01000137.1 Klebsiella pneumoniae strain Kp3380 plasmid unnamed23 contig00137, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 60-1889 bp Neighborhood of RT #1 [60, 1889] RVT-GII Feature: gene Location: 60-1547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1 1 55 bp Feature: gene Location: 1701-1889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PITM01000102.1 Klebsiella pneumoniae strain Kp3380 plasmid unnamed4 contig00102, whole genome shotgun sequence (8787 bp)
Overview 1 RT 1: 1-3146 bp Neighborhood of RT #1 [1, 3211] RVT-GII GIIM PHA02517 Feature: gene Location: 1-129 bp Feature: gene Location: 378-584 bp Feature: gene Location: 671-2194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 944-1676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 944-1676 bp Feature: domain Description: GIIM Note: maturase Location: 1751-1949 bp Feature: domain Description: GIIM Note: maturase Location: 1751-1949 bp Feature: gene Location: 2148-2573 bp Feature: gene Location: 2786-3211 bp Feature: domain Description: PHA02517 Location: 2810-3146 bp Feature: domain Description: PHA02 517 Location: 2 810-3146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: PITM01000005.1 Klebsiella pneumoniae strain Kp3380 contig00005, whole genome shotgun sequence (151705 bp)
Overview 1 RT 1: 32080-38933 bp Neighborhood of RT #1 [32080, 38950] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32080-32745 bp Feature: domain Description: INT_P4_C Location: 32185-32743 bp Feature: domain Description: INT_P4_C Location: 3 2185-3 2743 bp Feature: gene Location: 33006-33446 bp Feature: domain Description: Integrase_1 Location: 33012-33228 bp Feature: domain Description: Integrase_1 Location: 3 3 012-3 3 228 bp Feature: gene Location: 33503-35581 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33911-34355 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 3 911-3 43 55 bp Feature: gene Location: 35581-38190 bp Feature: domain Description: FimD Location: 35638-38179 bp Feature: domain Description: FimD Location: 3 563 8-3 8179 bp Feature: gene Location: 38222-38950 bp Feature: domain Description: FimC Location: 38270-38933 bp Feature: domain Description: FimC Location: 3 8270-3 893 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)