myRT

myRT report for GCA_002925745.1_ASM292574v1

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Seq: PITN01000008.1 Klebsiella pneumoniae strain Kp1803 contig00008, whole genome shotgun sequence (151709 bp)
Overview 1 RT 1: 32080-38933 bp Neighborhood of RT #1 [32080, 38950] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32080-32745 bp Feature: domain Description: INT_P4_C Location: 32185-32743 bp Feature: domain Description: INT_P4_C Location: 321 85-32743 bp Feature: gene Location: 33006-33446 bp Feature: domain Description: Integrase_1 Location: 33012-33228 bp Feature: domain Description: Integrase_1 Location: 3301 2-33228 bp Feature: gene Location: 33503-35581 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33911-34355 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3391 1 -34355 bp Feature: gene Location: 35581-38190 bp Feature: domain Description: FimD Location: 35638-38179 bp Feature: domain Description: FimD Location: 35638-381 79 bp Feature: gene Location: 38222-38950 bp Feature: domain Description: FimC Location: 38270-38933 bp Feature: domain Description: FimC Location: 38270-38933 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: PITN01000064.1 Klebsiella pneumoniae strain Kp1803 contig00064, whole genome shotgun sequence (8793 bp)
Overview 1 RT 1: 1-3152 bp Neighborhood of RT #1 [1, 3217] RVT-GII GIIM PHA02517 Feature: gene Location: 1-165 bp Feature: gene Location: 384-590 bp Feature: gene Location: 677-2200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950-1682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950-1682 bp Feature: domain Description: GIIM Note: maturase Location: 1757-1955 bp Feature: domain Description: GIIM Note: maturase Location: 1757-1955 bp Feature: gene Location: 2154-2579 bp Feature: gene Location: 2792-3217 bp Feature: domain Description: PHA02517 Location: 2816-3152 bp Feature: domain Description: PHA02 517 Location: 2 816-3152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: PITN01000087.1 Klebsiella pneumoniae strain Kp1803 contig00087, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 60-1889 bp Neighborhood of RT #1 [60, 1889] RVT-GII Feature: gene Location: 60-1547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: gene Location: 1701-1889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII