myRT

myRT report for GCA_002925765.1_ASM292576v1

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Seq: PRCV01000014.1 Aeromonas jandaei strain IMET J NODE_14_length_13887_cov_197_875707, whole genome shotgun sequence (13887 bp)
Overview 1 RT 1: 6155-12399 bp Neighborhood of RT #1 [6155, 12422] BID_1 DUF823 RVT-DGRs Avd_like PRK10808 Feature: gene Location: 6155-8683 bp Feature: domain Description: BID_1 Location: 7958-8213 bp Feature: domain Description: BID_1 Location: 7958-821 3 bp Feature: domain Description: DUF823 Location: 8321-8678 bp Feature: domain Description: DUF823 Location: 8321 -8678 bp Feature: gene Location: 8741-9271 bp Feature: gene Location: 9641-10882 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9842-10538 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9842-1 0538 bp Feature: gene Location: 10862-11248 bp Feature: domain Description: Avd_like Location: 10892-11222 bp Feature: domain Description: Avd_like Location: 1 0892-1 1 222 bp Feature: gene Location: 11367-12422 bp Feature: domain Description: PRK10808 Location: 11430-12399 bp Feature: domain Description: PRK1 0808 Location: 1 1 430-1 2399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BID_1 (smart00634), DUF823 (pfam05689), RVT-DGRs, Avd_like (cd16376), PRK10808 (outer membrane protein A; Reviewed)

Seq: PRCV01000001.1 Aeromonas jandaei strain IMET J NODE_1_length_1694816_cov_164_355412, whole genome shotgun sequence (1694816 bp)
Overview 1 RT 1: 480143-488694 bp Neighborhood of RT #1 [480143, 488720] HsdR EcoEI_R_C RVT-UG15 RMtype1_S_LdeBORF1052P-TRD2-CR2 RMtype1_S_LdeBORF1052P-TRD2-CR2 HsdM Feature: gene Location: 480143-481522 bp Feature: gene Location: 481811-484225 bp Feature: domain Description: HsdR Location: 481820-483446 bp Feature: domain Description: HsdR Location: 48182 0-483446 bp Feature: domain Description: EcoEI_R_C Location: 483746-484214 bp Feature: domain Description: EcoEI_R_C Location: 483746-4842 14 bp Feature: gene Location: 484313-486031 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 484811-485225 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 484811-4852 2 5 bp Feature: gene Location: 486046-487260 bp Feature: domain Description: RMtype1_S_LdeBORF1052P-TRD2-CR2 Location: 486133-486622 bp Feature: domain Description: RMtype1_S_LdeBORF1052 P-TRD2 -CR2 Location: 486133-48662 2 bp Feature: domain Description: RMtype1_S_LdeBORF1052P-TRD2-CR2 Location: 486655-487246 bp Feature: domain Description: RMtype1_S_LdeBORF1052 P-TRD2 -CR2 Location: 486655-4872 46 bp Feature: gene Location: 487257-488720 bp Feature: domain Description: HsdM Location: 487341-488694 bp Feature: domain Description: HsdM Location: 487341-488694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdR (COG4096), EcoEI_R_C (pfam08463), RVT-UG15, RMtype1_S_LdeBORF1052P-TRD2-CR2 (cd17278), HsdM (COG0286)

Seq: PRCV01000008.1 Aeromonas jandaei strain IMET J NODE_8_length_176676_cov_166_436428, whole genome shotgun sequence (176676 bp)
Overview 1 RT 1: 95867-100624 bp Neighborhood of RT #1 [95867, 100638] FimA RVT-UG4 FimA PRK15285 Feature: gene Location: 95867-96445 bp Feature: domain Description: FimA Location: 95897-96443 bp Feature: domain Description: FimA Location: 95897-96443 bp Feature: gene Location: 96745-97017 bp Feature: gene Location: 97447-99327 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 97810-98239 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 97810-9823 9 bp Feature: gene Location: 99320-99880 bp Feature: domain Description: FimA Location: 99359-99878 bp Feature: domain Description: FimA Location: 993 59-99878 bp Feature: gene Location: 99892-100638 bp Feature: domain Description: PRK15285 Location: 99925-100624 bp Feature: domain Description: PRK15285 Location: 99925-100624 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimA (pfam16970), RVT-UG4, PRK15285 (fimbrial chaperone StfD)