myRT

myRT report for GCA_002926955.1_ASM292695v1

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Seq: PIIS01000121.1 Escherichia coli strain F_GNB_2781 GNB-2781_contig_122, whole genome shotgun sequence (28905 bp)
Overview 1 RT 1: 22962-26944 bp Neighborhood of RT #1 [22962, 26970] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 22962-23993 bp Feature: domain Description: Asparaginase_2 Location: 23052-23985 bp Feature: domain Description: Asparaginase_2 Location: 23052-23985 bp Feature: gene Location: 24320-24469 bp Feature: gene Location: 24517-24963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24823-24925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24823-24925 bp Feature: gene Location: 25185-25556 bp Feature: gene Location: 25609-26970 bp Feature: domain Description: DcuC Location: 25612-26944 bp Feature: domain Description: DcuC Location: 2561 2-26944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)

Seq: PIIS01000133.1 Escherichia coli strain F_GNB_2781 GNB-2781_contig_134, whole genome shotgun sequence (35358 bp)
Overview 1 RT 1: 5141-8206 bp Neighborhood of RT #1 [5141, 8206] RVT-GII GIIM RVT-GII Feature: gene Location: 5141-5311 bp Feature: gene Location: 5449-5628 bp Feature: gene Location: 5727-6248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5733-6015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5733-6015 bp Feature: domain Description: GIIM Note: maturase Location: 6063-6243 bp Feature: domain Description: GIIM Note: maturase Location: 6063-62 43 bp Feature: gene Location: 6276-6815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6606-6684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6606-6684 bp Feature: gene Location: 6846-7043 bp Feature: gene Location: 7301-8206 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PIIS01000057.1 Escherichia coli strain F_GNB_2781 GNB-2781_contig_58, whole genome shotgun sequence (40896 bp)
Overview 1 RT 1: 27297-31179 bp Neighborhood of RT #1 [27297, 31184] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 27297-28013 bp Feature: domain Description: rph Location: 27300-28008 bp Feature: domain Description: rph Location: 273 00-28008 bp Feature: gene Location: 28064-28720 bp Feature: domain Description: pyrE Location: 28082-28715 bp Feature: domain Description: pyrE Location: 28082-28715 bp Feature: gene Location: 29018-29977 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29153-29702 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29153 -29702 bp Feature: gene Location: 30023-30619 bp Feature: domain Description: slmA Location: 30029-30605 bp Feature: domain Description: slmA Location: 3 0029-3 0605 bp Feature: gene Location: 30726-31184 bp Feature: domain Description: dut Location: 30732-31179 bp Feature: domain Description: dut Location: 3 073 2-3 1179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)