myRT

myRT report for GCA_002927045.1_ASM292704v1

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Seq: PRDW01000030.1 Paraburkholderia endofungorum strain HKI456 Ga0139053_130, whole genome shotgun sequence (10333 bp)
Overview 1 RT 1: 3961-9459 bp Neighborhood of RT #1 [3961, 9494] DUF1640 DUF1640 PHA02517 RVT-GII GIIM Resolvase Recombinase Zn_ribbon_recom RVT-GII PHA02517 Feature: gene Location: 3961-4431 bp Feature: domain Description: DUF1640 Location: 3979-4090 bp Feature: domain Description: DUF1 640 Location: 3979-4090 bp Feature: domain Description: DUF1640 Location: 4105-4300 bp Feature: domain Description: DUF1 640 Location: 41 05-4300 bp Feature: gene Location: 4470-4901 bp Feature: domain Description: PHA02517 Location: 4476-4881 bp Feature: domain Description: PHA0251 7 Location: 4476-4881 bp Feature: gene Location: 5027-5839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5108-5318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 08-531 8 bp Feature: domain Description: GIIM Note: maturase Location: 5420-5591 bp Feature: domain Description: GIIM Note: maturase Location: 5420-5591 bp Feature: gene Location: 5700-7562 bp Feature: domain Description: Resolvase Location: 5721-6159 bp Feature: domain Description: Resolvase Location: 5721 -61 59 bp Feature: domain Description: Recombinase Location: 6255-6612 bp Feature: domain Description: Recombinase Location: 6255-661 2 bp Feature: domain Description: Zn_ribbon_recom Location: 6657-6861 bp Feature: domain Description: Zn_ribbon_recom Location: 6657-6861 bp Feature: gene Location: 7857-8564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8130-8532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 30-8532 bp Feature: gene Location: 8630-8896 bp Feature: gene Location: 9183-9494 bp Feature: domain Description: PHA02517 Location: 9189-9459 bp Feature: domain Description: PHA0251 7 Location: 91 89-9459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1640 (pfam07798), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)