myRT

myRT report for GCA_002927215.1_ASM292721v1

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Seq: JPFF01000002.1 Pseudomonas aeruginosa strain W70322 contig2, whole genome shotgun sequence (1719393 bp)
Overview 1 RT 1: 70206-80511 bp Neighborhood of RT #1 [70206, 80513] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 70206-71327 bp Feature: domain Description: COG3177 Location: 70224-71316 bp Feature: domain Description: COG31 77 Location: 70224-71 31 6 bp Feature: gene Location: 71586-71723 bp Feature: gene Location: 72050-73735 bp Feature: RT Description: RVT_N Location: 72107-72347 bp Feature: RT Description: RVT_N Location: 721 07-72347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72395-73031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72395-73031 bp Feature: domain Description: GIIM Note: maturase Location: 73085-73316 bp Feature: domain Description: GIIM Note: maturase Location: 73085-7331 6 bp Feature: domain Description: HNH Note: nucleases Location: 73568-73706 bp Feature: domain Description: HNH Note: nucleases Location: 73568-73706 bp Feature: gene Location: 74816-78553 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 74924-75581 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 74924-75581 bp Feature: domain Description: PRK09776 Location: 75794-76277 bp Feature: domain Description: PRK09776 Location: 75794-76277 bp Feature: domain Description: PAS Location: 76343-76847 bp Feature: domain Description: PAS Location: 76343-76847 bp Feature: domain Description: PRK10060 Location: 76856-78503 bp Feature: domain Description: PRK1 0060 Location: 76856-78503 bp Feature: gene Location: 78660-80513 bp Feature: domain Description: PRK05658 Location: 78672-80511 bp Feature: domain Description: PRK05658 Location: 78672-8051 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)