myRT

myRT report for GCA_002927915.1_ASM292791v1

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Seq: NQXB01000002.1 Acinetobacter baumannii strain HEU5 411, whole genome shotgun sequence (246557 bp)
Overview 1 RT 1: 154477-160042 bp Neighborhood of RT #1 [154477, 160098] TetR_N RVT-Retrons PaaD PaaY Feature: gene Location: 154477-155079 bp Feature: domain Description: TetR_N Location: 154525-154648 bp Feature: domain Description: TetR_N Location: 1 54525-1 54648 bp Feature: gene Location: 156067-157293 bp Feature: gene Location: 157499-158671 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 157754-158408 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 57754-1 58408 bp Feature: gene Location: 159032-159415 bp Feature: domain Description: PaaD Location: 159074-159407 bp Feature: domain Description: PaaD Location: 1 59074-1 59407 bp Feature: gene Location: 159493-160098 bp Feature: domain Description: PaaY Location: 159502-160042 bp Feature: domain Description: PaaY Location: 1 59502-1 60042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TetR_N (pfam00440), RVT-Retrons, PaaD (TIGR02286), PaaY (TIGR02287)

Seq: NQXB01000011.1 Acinetobacter baumannii strain HEU5 57, whole genome shotgun sequence (130187 bp)
Overview 1 RT 1: 64-3895 bp Neighborhood of RT #1 [64, 4068] ligand_gated_channel RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 64-279 bp Feature: domain Description: ligand_gated_channel Location: 100-277 bp Feature: domain Description: ligand_gated_channel Location: 100-2 77 bp Feature: gene Location: 688-855 bp Feature: gene Location: 930-1877 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1041-1641 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1041-1641 bp Feature: gene Location: 1878-3422 bp Feature: domain Description: COG3950 Location: 2052-3201 bp Feature: domain Description: COG3950 Location: 2 052 -32 01 bp Feature: gene Location: 3427-4068 bp Feature: domain Description: TIGR02646 Location: 3526-3895 bp Feature: domain Description: TIGR02 646 Location: 352 6-3895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein), ligand_gated_channel (cd01347), RVT-Retrons