myRT

myRT report for GCA_002928995.1_ASM292899v1

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Seq: PERV01000021.1 Methylomonas sp. isolate FW.017 FD_1000679_33051, whole genome shotgun sequence (33051 bp)
Overview 1 RT 1: 19079-23780 bp Neighborhood of RT #1 [19079, 23791] YhcG YfmG RVT-DGRs Hrd YfmG Feature: gene Location: 19079-19357 bp Ori: PPD33951.1 Feature: domain Description: YhcG Location: 19100-19307 bp Feature: domain Description: YhcG Location: 1 91 00-1 9307 bp Feature: gene Location: 19994-20917 bp Ori: PPD33952.1 Feature: domain Description: YfmG Location: 20123-20906 bp Feature: domain Description: YfmG Location: 201 23-20906 bp Feature: gene Location: 21221-22240 bp Ori: PPD33953.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21431-22022 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21 431 -22022 bp Feature: gene Location: 22237-22734 bp Ori: PPD33954.1 Feature: domain Description: Hrd Location: 22495-22699 bp Feature: domain Description: Hrd Location: 22495-22699 bp Feature: gene Location: 22865-23791 bp Ori: PPD33964.1 Feature: domain Description: YfmG Location: 23039-23780 bp Feature: domain Description: YfmG Location: 23039-23780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhcG (COG4804), YfmG (COG1262), RVT-DGRs, Hrd (LOAD_Hrd)

Seq: PERV01000055.1 Methylomonas sp. isolate FW.017 FD_1000351_52975, whole genome shotgun sequence (52975 bp)
Overview 1 RT 1: 14807-19351 bp Neighborhood of RT #1 [14807, 19413] SAVED Csx3_III-U RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Cas2_I_II_III Feature: gene Location: 14807-15313 bp Ori: PPD32298.1 Feature: domain Description: SAVED Location: 15104-15290 bp Feature: domain Description: SAVED Location: 15104-152 90 bp Feature: gene Location: 15306-15563 bp Ori: PPD32299.1 Feature: domain Description: Csx3_III-U Location: 15381-15555 bp Feature: domain Description: Csx3_III-U Location: 15381-15555 bp Feature: gene Location: 16701-18830 bp Ori: PPD32300.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 16935-17541 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 16935-17541 bp Feature: domain Description: Cas1_I-II-III Location: 17832-18795 bp Feature: domain Description: Cas1_I-II-III Location: 17832 -18795 bp Feature: gene Location: 18827-19135 bp Ori: PPD32301.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 18872-19094 bp Feature: domain Description: Cas2 _I_II_III Location: 18872 -19094 bp Feature: gene Location: 19132-19413 bp Ori: PPD32302.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 19147-19351 bp Feature: domain Description: Cas2 _I_II_III Location: 19147-19351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SAVED (pfam18145), Csx3_III-U (cl09837), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)