myRT

myRT report for GCA_002929945.1_ASM292994v1

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Seq: PKNI01000099.1 Vibrio jasicida strain GB-215 scaffold246_cov120, whole genome shotgun sequence (38382 bp)
Overview 1 RT 1: 13061-17110 bp Neighborhood of RT #1 [13061, 17118] SLATT_5 RVT-UG17 mpi bcp Feature: gene Location: 13061-13276 bp Feature: gene Location: 13801-14454 bp Feature: domain Description: SLATT_5 Location: 13810-14401 bp Feature: domain Description: SLATT_5 Location: 1 381 0-1 4401 bp Feature: gene Location: 14456-15787 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 14684-15287 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 4684-1 5287 bp Feature: gene Location: 15961-16614 bp Feature: domain Description: mpi Location: 15967-16513 bp Feature: domain Description: mpi Location: 1 5967-1 651 3 bp Feature: gene Location: 16654-17118 bp Feature: domain Description: bcp Location: 16663-17110 bp Feature: domain Description: bcp Location: 1 6663-1 71 1 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, mpi (PRK13413), bcp (PRK09437)

Seq: PKNI01000040.1 Vibrio jasicida strain GB-215 scaffold85_cov120, whole genome shotgun sequence (153516 bp)
Overview 1 RT 1: 95045-99867 bp Neighborhood of RT #1 [95045, 99941] TIGR02646 COG3950 RVT-Retrons PRK07883 T3SC_IA_SycT-like Feature: gene Location: 95045-95713 bp Feature: domain Description: TIGR02646 Location: 95111-95543 bp Feature: domain Description: TIGR02 646 Location: 95111-95543 bp Feature: gene Location: 95717-97405 bp Feature: domain Description: COG3950 Location: 95951-97334 bp Feature: domain Description: COG3950 Location: 95951-97334 bp Feature: gene Location: 97398-98321 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 97500-98082 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 97500-98082 bp Feature: gene Location: 98833-99447 bp Feature: domain Description: PRK07883 Location: 98851-99367 bp Feature: domain Description: PRK07883 Location: 98851-99367 bp Feature: gene Location: 99513-99941 bp Feature: domain Description: T3SC_IA_SycT-like Location: 99528-99867 bp Feature: domain Description: T3SC_IA_SycT-like Location: 9952 8-99867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK07883 (DEDD exonuclease domain-containing protein), T3SC_IA_SycT-like (cd17032)