myRT

myRT report for GCA_002933275.1_ASM293327v1

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Seq: PSSX01000001.1 Marinobacter sp. N4 KEHDKFFH_1, whole genome shotgun sequence (548994 bp)
Overview 1 RT 1: 365592-371545 bp Neighborhood of RT #1 [365592, 371637] groES groEL RVT_N RVT-GII YkfC HNH DUF2188 T2SSN Feature: gene Location: 365592-365879 bp Feature: domain Description: groES Location: 365595-365877 bp Feature: domain Description: groES Location: 365595-365877 bp Feature: gene Location: 365958-367610 bp Feature: domain Description: groEL Location: 365961-367599 bp Feature: domain Description: groEL Location: 365961 -367599 bp Feature: gene Location: 368607-370304 bp Feature: RT Description: RVT_N Location: 368658-368895 bp Feature: RT Description: RVT_N Location: 368658-368895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368946-369591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 368946-369591 bp Feature: domain Description: YkfC Location: 369723-369888 bp Feature: domain Description: YkfC Location: 369723-369888 bp Feature: domain Description: HNH Note: nucleases Location: 370116-370251 bp Feature: domain Description: HNH Note: nucleases Location: 3701 1 6-370251 bp Feature: gene Location: 370365-370589 bp Feature: domain Description: DUF2188 Location: 370383-370560 bp Feature: domain Description: DUF21 88 Location: 370383-370560 bp Feature: gene Location: 370846-371637 bp Feature: domain Description: T2SSN Location: 371002-371545 bp Feature: domain Description: T2SSN Location: 371 002-371 545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), DUF2188 (pfam09954), T2SSN (pfam01203)

Seq: PSSX01000010.1 Marinobacter sp. N4 KEHDKFFH_10, whole genome shotgun sequence (139977 bp)
Overview 1 RT 1: 46330-49595 bp Neighborhood of RT #1 [46330, 49597] emrE RVT-GII GIIM HigB-like_toxin Feature: gene Location: 46330-46662 bp Feature: domain Description: emrE Location: 46333-46660 bp Feature: domain Description: emrE Location: 46333-46660 bp Feature: gene Location: 46894-47274 bp Feature: gene Location: 47343-48677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47622-48240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4762 2 -482 40 bp Feature: domain Description: GIIM Note: maturase Location: 48282-48507 bp Feature: domain Description: GIIM Note: maturase Location: 482 82 -48507 bp Feature: gene Location: 48769-48930 bp Feature: gene Location: 49319-49597 bp Feature: domain Description: HigB-like_toxin Location: 49331-49595 bp Feature: domain Description: HigB-like_toxin Location: 49331-49595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT emrE (PRK09541), RVT-GII, GIIM (pfam08388), HigB-like_toxin (pfam05015)

Seq: PSSX01000026.1 Marinobacter sp. N4 KEHDKFFH_26, whole genome shotgun sequence (92401 bp)
Overview 1 RT 1: 39176-48585 bp Neighborhood of RT #1 [39176, 48587] dnaG PRK05658 RVT-GII group_II_RT_mat HNHc PEP-CTERM FadL FadL Feature: gene Location: 39176-40903 bp Feature: domain Description: dnaG Location: 39185-40826 bp Feature: domain Description: dnaG Location: 3 9185-40826 bp Feature: gene Location: 41037-42884 bp Feature: domain Description: PRK05658 Location: 41049-42864 bp Feature: domain Description: PRK05658 Location: 41049-42864 bp Feature: gene Location: 43646-45508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43916-44735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 916-4473 5 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 44942-45068 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 44942-45068 bp Feature: domain Description: HNHc Note: nucleases Location: 45275-45434 bp Feature: domain Description: HNHc Note: nucleases Location: 45275-4543 4 bp Feature: gene Location: 46193-46948 bp Feature: domain Description: PEP-CTERM Location: 46868-46931 bp Feature: domain Description: PEP-CTERM Location: 46868-4693 1 bp Feature: gene Location: 47250-48587 bp Feature: domain Description: FadL Location: 47280-47523 bp Feature: domain Description: FadL Location: 47280-47523 bp Feature: domain Description: FadL Location: 47976-48585 bp Feature: domain Description: FadL Location: 47976-48585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaG (TIGR01391), PRK05658 (RNA polymerase sigma factor RpoD; Validated), RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507), PEP-CTERM, FadL (COG2067)