myRT

myRT report for GCA_002933855.1_ASM293385v1

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Seq: BFAQ01000007.1 Vibrio penaeicida TUMSAT-NU1 DNA, contig_7, whole genome shotgun sequence (55731 bp)
Overview 1 RT 1: 49052-53601 bp Neighborhood of RT #1 [49052, 53642] RVT-UG4 BtuF Feature: gene Location: 49052-50014 bp Feature: gene Location: 50809-51870 bp Feature: gene Location: 52005-52472 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 52041-52206 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 52041 -52206 bp Feature: gene Location: 52633-52761 bp Feature: gene Location: 52827-53642 bp Feature: domain Description: BtuF Location: 52857-53601 bp Feature: domain Description: BtuF Location: 52857-53601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, BtuF (cd01144)

Seq: BFAQ01000047.1 Vibrio penaeicida TUMSAT-NU1 DNA, contig_47, whole genome shotgun sequence (150690 bp)
Overview 1 RT 1: 70191-74410 bp Neighborhood of RT #1 [70191, 74472] SMC_prok_B SLATT_6 RVT-UG7 SLATT_4 Feature: gene Location: 70191-71135 bp Feature: domain Description: SMC_prok_B Location: 70218-70683 bp Feature: domain Description: SMC_prok_B Location: 702 18-70683 bp Feature: gene Location: 71598-72281 bp Feature: domain Description: SLATT_6 Location: 71601-72123 bp Feature: domain Description: SLATT_6 Location: 71601-72 12 3 bp Feature: gene Location: 72353-73882 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 72734-73154 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 72 734-73154 bp Feature: gene Location: 73654-73824 bp Feature: gene Location: 73879-74472 bp Feature: domain Description: SLATT_4 Location: 73915-74410 bp Feature: domain Description: SLATT_4 Location: 73915-74410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SMC_prok_B (TIGR02168), SLATT_6 (pfam18169), RVT-UG7, SLATT_4 (pfam18186)

Seq: BFAQ01000057.1 Vibrio penaeicida TUMSAT-NU1 DNA, contig_57, whole genome shotgun sequence (79084 bp)
Overview 1 RT 1: 55922-62440 bp Neighborhood of RT #1 [55922, 62440] MA SpoIVFB RVT-Retrons Feature: gene Location: 55922-56968 bp Feature: domain Description: MA Location: 56222-56957 bp Feature: domain Description: MA Location: 56222-56957 bp Feature: gene Location: 57327-58406 bp Feature: domain Description: SpoIVFB Location: 57555-58332 bp Feature: domain Description: SpoIVFB Location: 57555-583 3 2 bp Feature: gene Location: 58442-60358 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 59063-59678 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 59063 -59678 bp Feature: gene Location: 60388-60588 bp Feature: gene Location: 60785-62440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MA (smart00283), SpoIVFB (COG1994), RVT-Retrons